KEGG   Hydrocarboniclastica marina: soil367_13310
Entry
soil367_13310     CDS       T06192                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
hmi  Hydrocarboniclastica marina
Pathway
hmi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    soil367_13310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmi03400]
    soil367_13310
DNA repair and recombination proteins [BR:hmi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     soil367_13310
SSDB
Motif
Pfam: Ku EF-hand_6
Other DBs
NCBI-ProteinID: QCF26832
UniProt: A0A4P7XKH0
LinkDB
Position
2973494..2974498
AA seq 334 aa
MAQAIWKGQVSFGLLNVPVTLYSGEVRNDIKLRMLDSRNDARVRYERVNEETGDEVPWNE
IVKAYEYDKDNYVKIDQDELKEFLTEANNNVELESFIDATDLDPRFYEKPYYLVPQKKFE
KGYVLLRESLKQSGMIGIARVVIRTRNHLAAVIPYDDALILNILRFCEEVRALDNYNFPA
GDVSDYRISDKELKMSMDLINSMKTEWDPEDYHDEYRKRLLEYVEQKVSKAKPKKSKKSD
QPEPSSNVVDLQDLLRKSLEKNSKPKAPGKTSRKSNGDSDTGTKSGKTGSGKAASGARKS
ASGSKRATTGTARKQTKDNKADATAGTTSKRKTS
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggctcaggctatctggaagggacaggtttcgtttggtcttctgaacgtaccggtaacg
ctgtattcaggcgaagtacgcaacgatatcaagttgaggatgctggacagccgtaatgac
gcccgggttcggtatgagcgtgtcaatgaggagaccggggacgaagtgccctggaatgag
attgtcaaagcttacgagtacgacaaggacaactacgtaaagattgaccaggacgagctc
aaggagtttctgaccgaagccaacaataacgtcgagctggagtctttcattgacgcgacc
gacctggatccccgtttttatgaaaagccctactatctggttccgcagaaaaagttcgag
aaaggctatgtgctccttcgggaatctctcaaacagagcggtatgatcggcatcgcccgc
gtcgtcatccgtacccgtaatcacctggccgcggtgataccttacgacgacgccctgata
ctcaacatacttcgcttctgcgaagaagtccgcgcgctggacaactataactttcccgct
ggcgacgtttcagattaccggatctccgataaggagctgaaaatgtcgatggacctcatc
aactcgatgaagaccgaatgggatccagaggactaccacgacgagtatcgcaagcgtttg
cttgagtacgtcgaacagaaagtcagtaaggccaagcccaaaaagagcaagaagtccgac
cagccggaaccgagcagcaatgttgtggacctgcaggatctgctacgtaagagcctggaa
aagaactcgaagcccaaggcacccgggaagaccagccgcaaatccaacggtgactcggat
accggaacaaagtcaggtaaaaccggttcgggaaaggccgcatcgggtgccaggaagtca
gcttcaggatcaaagcgggcgacgaccgggacggccaggaagcagacaaaggataacaaa
gcggacgcaacggcaggcacgacgagcaagcgcaaaacatcatag

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