Hydrocarboniclastica marina: soil367_16000
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Entry
soil367_16000 CDS
T06192
Symbol
panP
Name
(GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi00250
Alanine, aspartate and glutamate metabolism
hmi00410
beta-Alanine metabolism
hmi00430
Taurine and hypotaurine metabolism
hmi00650
Butanoate metabolism
hmi01100
Metabolic pathways
hmi01110
Biosynthesis of secondary metabolites
hmi01120
Microbial metabolism in diverse environments
hmi02024
Quorum sensing
Module
hmi_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
soil367_16000 (panP)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
soil367_16000 (panP)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
soil367_16000 (panP)
00430 Taurine and hypotaurine metabolism
soil367_16000 (panP)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
soil367_16000 (panP)
Enzymes [BR:
hmi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
soil367_16000 (panP)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Imm32
Motif
Other DBs
NCBI-ProteinID:
QCF27312
UniProt:
A0A4P7XLM4
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All DBs
Position
3591463..3593130
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AA seq
555 aa
AA seq
DB search
MSGSKKTAQASLEAMYRVFTVAEAPDSALSRIDQLISRNLAGFLQDHIVATEKDLSEVEK
DFADPNIPDKPMFVSEQAQFLLDKLVANSVHTASPSFVGHMTSALPYFMLPLSKIMIALN
QNLVKTETSKAFTPLERQVLGMLHRLVYKKDGGFYRARMHDAHHALGAMTSGGTLANITA
LWVARNHAFPAEGSFRGIHREGLFRALRYYGHEGAAILVSRRGHYSLRKAADVLGLGRDA
LIAVDTDEDNRILEDDLRNKCLELQRQRIRILAIVGIAGTTETGHVDPLDTLADVAREFN
AHFHVDAAWGGPTLFSRQYAPLLRGIEQADSVTFDAHKQLYVPMGAGLVLFKDPTLVRAI
EHHAQYIIRKGSKDLGSTTLEGSRPGMAMLIHSGLRIIGREGYELLINQGIEKACAFADM
IDQHSHFELISKPELNILTYRFAPPDALQALSQADQRQREKINAHLNRITKFLQKTQRER
GKAFVSRTRLEPPRYDSYPCVVFRVVLANPLTTLGILNEILREQQALAGEPAIESEMTAL
KRTVDEVLNASAGAS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcagtaagaaaaccgctcaggccagtctcgaagccatgtatcgggtattcacc
gtagccgaggcccccgactcagccctgagccgaatcgaccagctaatctcaaggaaccta
gccggtttcttgcaagaccatattgttgcgaccgaaaaagacctgagtgaagtcgagaaa
gacttcgcagacccgaacattcccgacaaacccatgttcgtctccgaacaggcccagttt
ctgcttgataagctggtagccaactccgtccatacggcctcccccagctttgtcgggcat
atgacctcagcgctgccttactttatgctgccgctgagcaagatcatgatcgcgctcaac
cagaatctggtaaaaacggaaacctcgaaggccttcactccgctggaacggcaagttctg
ggcatgctccaccggttggtctacaagaaggacggcggtttctatcgcgcgcgaatgcac
gatgctcaccacgccctcggcgcgatgacgtccggcggcacgctggccaatatcacagcg
ttatgggtagcgcgaaatcatgcctttccggccgaaggcagcttccgcggcatccaccgg
gagggtttgttccgggcgttgcgctactacgggcatgagggcgctgcgattcttgtctcg
cgccggggccattactcgctgcgcaaagccgccgatgtccttggcctgggcagagatgcc
ctgattgcggtggatacagacgaggataaccggatactggaagacgacctgcgcaacaag
tgccttgaactgcagcgtcaacggatccgtatcctggctattgtcggtatcgcgggcacc
accgaaaccggccatgttgacccgctggacacgctggcggatgtagcgagagagtttaac
gcgcacttccacgtggacgccgcctggggtggccccaccctcttttcgcggcagtacgca
ccgctgcttcgcggcatcgaacaggccgattcagtcacattcgatgcccacaagcagctc
tatgtaccgatgggtgccggattggtgctgttcaaggacccgacgcttgtcagggcgatc
gagcatcatgcccagtacattatccgcaagggctcgaaggatctgggcagtacgacgctg
gagggctcacgcccgggtatggcgatgctgatccattcgggcctgaggattatcggtcgc
gaaggctatgaacttttgatcaaccagggtattgaaaaagcgtgcgcgttcgctgacatg
atcgaccagcacagccacttcgagctcatcagcaagccggaactgaacatcctgacctac
cgttttgccccgccagatgctttgcaggcactgagtcaagcggatcaacgccagcgggag
aaaatcaatgcgcacctcaaccggataaccaaatttctgcagaagacgcagagggaacgt
ggcaaggcatttgtctcccgtacgagactggagcctccgcgctacgacagctacccttgc
gtggtttttcgggtggtgctggcaaacccgctcactacgcttggcatccttaacgagata
ctacgggaacagcaggcgcttgccggtgagccggcgatagagtctgagatgaccgcgctt
aagcgaaccgttgatgaagtactgaatgcgtccgccggtgccagctag
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