Hydrocarboniclastica marina: soil367_16090
Help
Entry
soil367_16090 CDS
T06192
Name
(GenBank) tRNA 2-selenouridine(34) synthase MnmH
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmi03016
]
soil367_16090
Enzymes [BR:
hmi01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
soil367_16090
Transfer RNA biogenesis [BR:
hmi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
soil367_16090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
Rhodanese
AAA_22
T2SSE
AAA_25
AAA_11
AAA_7
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QCF27328
UniProt:
A0A4P7XJZ6
LinkDB
All DBs
Position
3609845..3610963
Genome browser
AA seq
372 aa
AA seq
DB search
MPARPDTDQFQQLFLHDIPLMDVRAPVEFSQGAFPQAENIPLMNDQERHAVGIRYKESGQ
EAALELGHSLVRDSIKSERIAAWQDFARRHPHGYLYCFRGGLRSRLVQSWLAETGLEYPL
IQGGYKALRRYLIDTLEAEVARQSLVLVSGRTGTGKTRLLVQLPKQVDLEGLAKHRGSSF
GRTLEPQPSQIDFENALAINLLKTGTQPGPLYLEDESRLVGRCALPLSLREKMARSPMII
LERTLDERIDIILEDYVVNMALAFQDRFGQETGFAQFSEFLRDSLARLRKRLGGARYQQL
DSVMVEALESQASRGDLTGHRVWIHELLTGYYDPMYDYQLANRQGEVLHQGSLDDLLDWT
ASRPSANALTGL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgacccgatacagaccagtttcagcaactgttcctgcacgacatcccgcta
atggatgtgcgtgcgcctgtagagttcagccagggcgcctttccccaggcggaaaatata
ccgctgatgaatgaccaggagcgtcacgcggtcggcatccgatacaaggaatccggccag
gaggcggcgcttgaactgggccattcactggttcgggacagtataaagtcggagcgaata
gcggcgtggcaggacttcgcccgccggcatcctcatggttatctctactgctttcgcggc
ggccttcgatctcgtctggtgcagtcctggctcgctgaaacgggtctcgagtatccgctg
atccagggcggctacaaggcgcttcgacgttaccttattgatacgctggaggctgaagta
gcgcgccagtcgctggttcttgtaagcgggcgtaccggtaccggcaaaacgcgcctcctg
gttcagctgcccaaacaggttgacctggaagggctcgccaagcaccggggttcgagcttt
ggccgcacactcgagccccagcccagtcagatcgacttcgagaatgcgctggcaataaac
ctgctcaagaccgggacacaaccaggaccactctatcttgaggatgagtcgcgactggtg
ggccgctgcgccttgccgctcagtctgcgcgagaagatggccaggtcgccgatgattatt
cttgagcggacgctggacgagcgtattgacatcattcttgaagattacgtggttaacatg
gctttagcgttccaggaccgattcgggcaggaaaccggcttcgcgcagttcagcgaattt
ctccgggatagcctcgcaaggctgcggaaacgtctgggcggggcacgctaccagcaactg
gatagtgtcatggtcgaggcgctcgagtctcaggcatcacggggcgatctcaccggccac
cgcgtgtggattcatgagcttctgacgggctattacgaccccatgtacgactatcaactg
gcaaaccggcaaggagaagttctccaccagggtagcctggatgaccttctcgattggacc
gcaagtcgtccttcggctaacgccttgacggggctctag
DBGET
integrated database retrieval system
