Hydrocarboniclastica marina: soil367_16485
Help
Entry
soil367_16485 CDS
T06192
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmi03021
]
soil367_16485
03009 Ribosome biogenesis [BR:
hmi03009
]
soil367_16485
Transcription machinery [BR:
hmi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
soil367_16485
Ribosome biogenesis [BR:
hmi03009
]
Prokaryotic type
rRNA transcription factors
soil367_16485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_KhpA-B
DUF4332
T6SS_Tse3_N
KH_2
Motif
Other DBs
NCBI-ProteinID:
QCF27395
UniProt:
A0A4P7XKH5
LinkDB
All DBs
Position
3698527..3700020
Genome browser
AA seq
497 aa
AA seq
DB search
MNKEILLVVDAVSNEKGVDKDVIFEAIELALATAAKKRYEEEDVDIRVSIDRKTGEYETF
RRWTVVDNDAVPSLGADLTLEEAHEKDTSLQPGDIVEEKTESVAFGRIGAQAAKQIIFQK
VREAERAKIVDSYRDRVGELVSGTVKKVTRDNVIVDLGNNAEAILPRDQLIARETFRMGD
RVRSLLQEIKADHRGPQLMLSRTSPNMLIELFRIEVPEIAEELIEIRGAARDPGSRAKIA
VKTNDGRIDPVGACVGMRGSRVQAVSNELGGERIDIILWDDNAAQLVINAMAPAEVASIV
VDEEKNTMDVAVAEDNLAQAIGRNGQNVRLASELTGWELNVMTEDEAGERQEQEAQRLVD
YFVKHLEVDEELALVLAEEGFTTLDEVAYVPMAEMLNIEGFDEDLVGELRARAKDALLNQ
ALASEEALEGAEPAEDLLAMEGMDRSLAFALAKIGVRTQEDLAEQSVDDLAEIEGMDEER
AGKLIMTARAPWFENQE
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagatcttgctggttgtggatgcggtgtccaacgaaaagggcgtcgacaaa
gatgtaatcttcgaggccatagaattggccctcgccaccgccgcgaaaaaacgctacgaa
gaagaagacgtggacattcgcgtatccattgatcgcaagaccggtgaatacgagacattc
cgtcgctggaccgttgtcgacaatgacgctgttcccagcctgggcgctgacctcacgctg
gaagaagcccatgagaaggataccagcctgcaaccgggcgacatcgtcgaggaaaagacg
gaatctgtcgcgtttggccgcataggtgcccaggctgcgaagcagattattttccagaag
gtgcgggaagccgagcgtgccaagattgtcgatagctaccgcgatcgggtgggcgagctg
gtttccggtaccgtcaagaaagtcactcgcgacaacgtgattgtcgacctcggcaataac
gctgaagcgattcttccccgtgaccagctgatcgcgcgcgagaccttccgcatgggcgac
cgtgttcgctctctgctgcaggagatcaaggctgatcaccgcggcccgcagctgatgctg
agccgtaccagtccgaacatgcttatcgagctgttccgtattgaagttccggagatcgcc
gaagagctgatcgagatccggggtgcagcccgcgacccgggctcccgcgcaaaaatcgcc
gtcaaaaccaacgatggccgtattgatcccgttggcgcctgcgtaggcatgcgtggttcc
cgggtacaggccgtgtccaacgagttgggcggtgagcggatcgatatcatcctctgggat
gacaacgccgctcagctggtcatcaacgccatggcgccggcagaagtggcgtccatcgtt
gttgatgaagaaaagaacaccatggacgtcgccgttgcagaggataatcttgcccaggcg
attggccgtaacggtcagaatgttcggctggcctctgaattgaccggctgggaactgaac
gtcatgaccgaagacgaagccggagagcgccaggaacaggaggcgcagaggctggtcgac
tacttcgtcaagcatcttgaagtagacgaagagctggccctggtgctggccgaagaaggc
tttaccacccttgatgaagttgcttacgtgccgatggccgaaatgctcaacatcgagggc
ttcgacgaagacctggtaggcgaactaagagcgcgcgccaaagatgcgttgttgaatcag
gccctggcaagcgaagaagcgctggaaggcgcggagccggctgaagaccttctggcaatg
gaaggaatggatcggagcttggcgttcgccctggccaagatcggggttagaacccaggaa
gacctggccgagcaatccgtcgacgacctcgctgaaatcgaaggtatggacgaagaacgc
gccggaaaattgattatgaccgcccgcgcgccctggttcgaaaaccaggaatag
DBGET
integrated database retrieval system
