Hydrocarboniclastica marina: soil367_17360
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Entry
soil367_17360 CDS
T06192
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmi02000
]
soil367_17360
Transporters [BR:
hmi02000
]
Other transporters
Pores ion channels [TC:
1
]
soil367_17360
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QCF27547
UniProt:
A0A4P7XMV5
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All DBs
Position
complement(3900520..3902499)
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AA seq
659 aa
AA seq
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MKSPFSVHAPRPLPLVSLVSLSLTSLGLAAQEPLVLDELVVTASGYEQQVVDAPASISVI
SREEIERGAFRDVTDVLRDVPGVIVTGGGSGDRGADITMRGMPSSYTLMLVDGKRVSSRE
SRPNGSAGFEQDWLPPMGAIERIEVIRGPMSTLYGSDALGGVINVITRKVPQQWGGELQL
DTVLQEDQDSGNIYQTNFFVGGPLATDLLGLQIYGRQYTREEDQIIDGYEEKQLQSVTGR
LSFTPTEDHDFMLESGIVDQHRRGFMGVSEPTEDCGRGGCSDSESEHFRKFYALSHTGRW
SFGNTDSYVQRESTHNESRDIEITNTLAKSSVVVPLGDHIVSLGTSYEEEELKDQTTNQI
SDRTRVEGSQWALFAEDEWLLTEDFSLTGGVRLDDDENYGSHVSPRLYGVWGFAPRWTVK
GGVSTGFRSPNLREVTPDWGQISRGGDVYGNPDLEPETSVSKEISLHYRVPGGFSSNVTV
FHNDFEDKITRVACPATVCTDGPNQFGSDPTTRVNVDEAITRGVEFALRAPIISSLEIDT
SYTYTDSEQKSGEYEGEPLTQLPKHIATVSLRWFLNERVSPWLSATYRGEESQPNTGPSQ
DALVAPSYTLVDTGLGYQLTDEAEVKAGVYNLLDKSVTTEEYGLVEDGRRYWLALNIGF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaccgttttccgttcacgcccccaggcccttgcctctggtttcgctggtctcg
ttgagcctgacatcgctcggactcgcagcccaggagccgttggtcctcgacgagctggtg
gttaccgccagcggctacgagcaacaggtggtggacgcgccggcctctatcagcgtcatc
agccgggaagagatcgagcgcggtgcgtttcgggatgtcactgatgtactgagagatgtg
cccggggtgattgttactggcggcggctccggcgacagaggggcggatatcaccatgcgc
gggatgcccagcagctacacgctgatgctggtggatggcaagcgggtgtccagccgggag
agccgacccaatggcagcgccgggtttgagcaggactggctgccaccgatgggtgcaatt
gaacgcatcgaggtcattcgcgggcccatgtcgacgctgtatggctcggacgcactcggc
ggcgtcatcaacgtgattacccgcaaagtgcctcagcagtggggcggggagctgcagctg
gacacggttctgcaggaagatcaggattctggcaatatctaccagaccaacttctttgtt
ggcgggccgctcgcgaccgatctgctgggtctgcagatctatggccggcagtacacccga
gaggaagatcagatcatcgacggctatgaggaaaagcagctgcagagtgttaccggccgg
ctttccttcacccccaccgaggaccatgacttcatgctggaaagcggcatcgtcgaccag
caccggcgcggcttcatgggggtctccgagcccacggaagactgtggcagaggcggctgt
tctgactcagaatccgagcatttccgtaagttctacgcgctgtctcatactggacgatgg
tcctttgggaacacggattcctatgtccagcgtgaatccacccataacgaaagccgtgat
atcgagatcaccaacacgctcgccaagtccagtgttgtggtcccgctaggcgaccacatc
gtttcccttggcaccagctatgaagaagaagagttgaaggatcagaccactaaccagatt
tccgaccggacccgggtggagggttcccaatgggctttgtttgcagaggatgagtggctg
ttaacagaagacttctcgctgaccggcggggtgcgcctggatgatgatgagaattatggc
agccatgtcagcccaaggctctacggagtatggggctttgcgccgcgctggacggtcaaa
ggcggcgtgtccacgggcttccgttcgccaaatcttcgcgaagtgacgccggactggggc
cagatcagccggggtggggacgtctacggcaacccggatctggagcctgagacctccgtg
tccaaggaaatttccctgcactatcgggtaccgggtggcttcagcagcaacgtgaccgtt
tttcataatgactttgaagacaaaattacccgcgtcgcctgcccagccactgtctgcaca
gacggacccaaccagtttggctccgatccgaccacgcgcgtcaacgtggacgaagccatt
acccggggcgtggagtttgctttgcgcgcacctatcatcagcagcctcgagatcgacacc
agctatacctacaccgattccgaacagaaatccggtgaatacgagggcgagccactgacc
cagttgcccaagcatattgccacagtgtccctgcgctggttcctcaacgaacgcgtctca
ccctggctatcggccacttaccgcggcgaagaaagccagcccaataccgggccctcccag
gatgcactggtggcgccctcgtacaccctggtggataccgggctgggctaccaactgact
gacgaggccgaagttaaggccggggtctataacctgctcgataaatctgtcaccaccgaa
gaatacggtctggttgaggatggtcgacgttactggctggcgctgaatattggcttctga
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