Hydrocarboniclastica marina: soil367_17785
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Entry
soil367_17785 CDS
T06192
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_17785
Enzymes [BR:
hmi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
soil367_17785
DNA repair and recombination proteins [BR:
hmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
soil367_17785
Prokaryotic type
soil367_17785
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QCF27625
UniProt:
A0A4P7XL25
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All DBs
Position
complement(3990938..3992338)
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AA seq
466 aa
AA seq
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MTQLVWFRNDLRVADNAALTAACKSGDPVTACFVVTPGQWQNHDWSPARIGFVLDHVNAL
AAELARLGIPMHFLDCEDFQDTVTRLLDHCREHKVRHVHINEEYGVNERRRDKAIANKLA
EADIRFQKYRDQTIAPVGSILTGQQKPFSVFTPFSRRWRNWVDETRPTPWPVPSPVAAPV
KPAQYHSSVAGSEGAPPPLVATGEDAAHQQLERFLDEQVGGYKAQRDFPACAGTSLLSPY
LANGVLSGQQCVTAAQQAQGAGGEQEGLATWINELAWRDFYIHILYHFPRVSMNRAFKPE
TEALQWNPPGEAFEAWKAGETGIPMVDAAMRQLNQTGWMHNRLRMVTAQFLTKNLFINWQ
VGERYFSSRLVDGFLASNNGGWQWSASTGTDAAPYFRVFNPVTQGERFDPKGVFIRQYLP
ELTDLDNKRIHQPWVGGTPPNGYPSPIVDLKESRKEAIARFQALKD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacttgtctggttccgaaacgacctgcgcgtcgccgacaacgcggccctgacg
gctgcatgcaaatccggcgacccggtaacagcctgctttgtggtgacgcccgggcaatgg
cagaaccatgactggtcgccggcgcgtatcggtttcgtgctggaccacgttaatgcactg
gccgcggaactggcccggctcggcattcccatgcattttcttgactgtgaggacttccag
gacaccgtcacacgcctgctggaccactgtcgtgagcacaaggttcggcatgtgcacatc
aacgaagaatatggggtcaacgagcgccgccgggacaaggccatcgccaacaagctggcc
gaagccgatatccgctttcagaagtaccgggaccagaccattgcacccgtgggtagcatt
ctcaccggccagcagaagcctttttccgttttcaccccgttcagccggcgctggcgcaac
tgggttgatgagacccgcccgacgccctggccggtgccttcaccagtcgctgccccggta
aagccggcgcagtaccactcctcggttgctggcagtgagggtgcgccgccaccgttggtg
gccacgggtgaggatgccgcacaccagcagttggaacgctttctggacgagcaggtaggc
ggctacaaagcccagcgggactttccggcctgcgccggcaccagtctcctgtcaccctat
ctggccaatggcgtattgtcgggccagcaatgcgtgacggccgcgcaacaggcacaggga
gcagggggcgaacaggaggggctagccacctggatcaacgagctggcctggcgcgatttc
tacatccacatcctttaccactttccccgcgtcagcatgaatagggccttcaaaccagaa
accgaggcactgcaatggaacccgcccggggaagccttcgaggcgtggaaagcgggggag
actggtattcccatggtcgacgccgccatgcgccaactgaaccagaccggctggatgcac
aaccgcctgcgcatggtcacggcccagtttctgaccaagaacctctttatcaactggcag
gtgggggaacgctacttctcatcgcggctggtggacggcttcctcgcgtccaacaatggc
ggctggcaatggagcgcctctaccggcaccgacgcggcgccttactttcgcgtattcaac
ccggtgactcagggcgaacgtttcgacccgaagggtgtgttcatccgccagtatctgccg
gagctgaccgacctcgacaacaaacgtatccaccagccgtgggtcggcggaacgcccccg
aacggctaccccagccccatcgttgatctgaaagaaagccggaaggaggctatagcgcgg
tttcaggcgctgaaggattag
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