Haematobacter massiliensis: HmaOT1_05515
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Entry
HmaOT1_05515 CDS
T05861
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
hml
Haematobacter massiliensis
Pathway
hml02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HmaOT1_05515 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hml02000
]
HmaOT1_05515 (choW)
Transporters [BR:
hml02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
HmaOT1_05515 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QBJ23754
LinkDB
All DBs
Position
complement(787689..788525)
Genome browser
AA seq
278 aa
AA seq
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MDWITSTKIPVGRTAKLVFDWLNLHAAAFFNALSTGMQALIDGILWLLLTPPPLVIVAIF
VAVAFAIQRNWKAPLIVLVGFLFVMNQGYWQATMESLTLVLSACVVCMAIGVPVGVFLAH
RPRLYAWVAPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPAPIRLTYLGISS
TPSALTEAATAFGATPRQKLWKVELPYATPQIMAGLNQTIMLSLSMVVIAALVGANGLGV
PVVRALNTVNTSLGFEAGFVIVIVAILLDRMLRVEGRK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggactggataacctcgaccaagatcccggtcggacgcacggcgaaacttgtgttcgac
tggctcaacctgcatgcggcggcgttcttcaatgcgctgtccaccggaatgcaggcgttg
atcgacgggatattgtggctcctgctgacgccacccccgctggtcatcgtggcgatcttt
gtcgccgtcgccttcgccatccagcgcaactggaaggcgcccctgatcgtgctggtgggt
tttctcttcgtgatgaaccagggctactggcaggccacgatggaaagcctgacgctggtg
ctctccgcctgcgtcgtgtgcatggcgatcggagtgcccgtcggcgtgttcctcgcccac
cggccaaggctttacgcctgggtcgccccagtgctcgacctgatgcagacgctgccgacc
ttcgtgtatctcatccccgccatcgtgttcttcggcatcggcatggtgcccggcctgatc
gcgacggtgatcttcgtcctgcctgcgccgatccggctgacctatctcggcatatcctcc
acgccctccgcgctcacggaggccgcgacggccttcggggccacgccgcgccagaagctg
tggaaggtagagcttccctacgccactcctcagatcatggcgggcctgaaccagacgatc
atgctctcgctctccatggtggtgatcgcggcgcttgtcggagccaacgggcttggcgtg
ccggtggtgcgggcgctgaacacggtcaatacgtcgctgggcttcgaggcaggcttcgtc
atcgtcatcgtcgccatccttcttgaccggatgcttcgcgtggagggccgcaaatga
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