Haematobacter massiliensis: HmaOT1_08695
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Entry
HmaOT1_08695 CDS
T05861
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hml
Haematobacter massiliensis
Pathway
hml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HmaOT1_08695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hml03400
]
HmaOT1_08695
Enzymes [BR:
hml01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HmaOT1_08695
DNA repair and recombination proteins [BR:
hml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HmaOT1_08695
Prokaryotic type
HmaOT1_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBJ24326
LinkDB
All DBs
Position
1435572..1436231
Genome browser
AA seq
219 aa
AA seq
DB search
MTFQIAAPPAAWADLPFFGRDWPEVRARLVADTRKLQPGPDAVFRALDLCPPEKARVVIL
GQDPYPTAGNADGLAFSVPPGTRLPASLRNIYREMAEDIGCTPPDGDLGRWAAQGVLLLN
TALTVPVGEANGHARLGWAPLVAEVLARAAALRPLVFILWGGPAQKLAARTVDLSRHHVI
ASPHPSPLSSYRGFFGSRPFSRTNDWLTARGETPIDWCR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcagatcgcggcgccgcccgccgcctgggccgatctgccgttcttcggtcgg
gactggcccgaggttcgcgcccggcttgtcgccgatacgcgcaagctccagcccggaccc
gatgcggtgttccgggcgctcgatctctgcccgccggagaaagcgcgtgtggtgatcctt
ggtcaagatccctacccgactgcgggaaatgccgatggactggccttttcggttccgccc
ggcacgcggctgcccgcctcgctgcgcaatatctaccgcgagatggccgaggatatcggc
tgcacaccgcccgatggtgatctcggtcgctgggctgcgcagggcgtactgcttctcaac
accgcactgaccgttccggtgggagaggcgaacggccatgcgcggctgggctgggcaccg
ctcgtcgctgaggtgctggcgcgcgcggcggcgctccggcccctcgtgttcatcctctgg
ggcgggcctgcgcagaagctggcggcgaggacggttgacctttcccgccatcacgtcatc
gcctcaccccacccgtcgccgctctcctcctaccgcggcttcttcggctcgcgccctttc
agccggacgaatgactggctgacagcaaggggcgaaacgccgatcgactggtgccgctga
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