Haematobacter massiliensis: HmaOT1_10330
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Entry
HmaOT1_10330 CDS
T05861
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hml
Haematobacter massiliensis
Pathway
hml03030
DNA replication
hml03430
Mismatch repair
hml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HmaOT1_10330
03430 Mismatch repair
HmaOT1_10330
03440 Homologous recombination
HmaOT1_10330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hml03032
]
HmaOT1_10330
03400 DNA repair and recombination proteins [BR:
hml03400
]
HmaOT1_10330
Enzymes [BR:
hml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HmaOT1_10330
DNA replication proteins [BR:
hml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HmaOT1_10330
DNA repair and recombination proteins [BR:
hml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HmaOT1_10330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
QBJ24605
LinkDB
All DBs
Position
complement(1771378..1774872)
Genome browser
AA seq
1164 aa
AA seq
DB search
MTAPRFIHLRVHSEYSLLEGAVPVKKLVKLCVEAGMPAVALTDTNSMFGALEFSTLASGA
GVQPIVGCQVSLLTGAAAPGQKARRTAPLVLLAQNEAGYRNLMKLSSCLYLDAGGELPSV
TLEELATHAEGLICLTGGPEGAVGQHLIAGHRDKAELLLEQLARIYPDRLYVELQRHPGE
GGAPAAAERATERGFVEMAYAMDLPLVATNDVYFPKTEMYEAHDAMICIADGAYVDQQEP
RRRLTPQHYFKSEAEMVTLFADLPEAVENTVEIARRCAFKVKKHPPILPRFADDEVEELR
RQAWNGLRDRLAVIPHSASVAEYEARLTFELDIIEQMGFPGYFLIVADFIKWAKQRDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QEKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPVEGVKPVSIAKALA
DEPRLREAAKTEEVVARLLRYAEQIEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEAAGLVKFDFLGLKTLTVIQNAIDLILAGGGELHRSADGRALYAPKEGAA
NDIGHIPLDDVPTYELYASAKTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLRPIESIHPSIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIAEEMAKERPKFVNGAVANGVDTKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAAVMNCDIHLTDKLNVYKREVDRLGIETVPPCVNRSLATFSVKDGRV
VYALGALKNVGVEAMRAIVEARGDKPFRDLFDVARRVDLKRIGKRPLEMLARAGAFDTLD
RNRRRVFDSLDALVAWSAAVHEARVSAQVSLFGEAGDDLPEPRLVNCDDWLPVERLAEEH
QAIGFYLSGHPLDDYMPSLKRKGVLTLEALSRQAERGPTVAKLAGSVSSRQERKSAKGNR
FAFVQLSDPTGLYEVTVFSETLEATRQFLEPGSAIVLTVEATMEADTLKLLARGAAPIDG
VVADAGTAGLRIHLEEARAARSVAALFERMAEQRIRSRAPIEFCVTDPETGREIVIRLGD
DYPVSPQIKGAIKAIGGVSLVEEV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccccccgattcatccatctccgcgtccattccgaatattcgctcctcgaaggg
gcggtgccggtgaagaaactcgtaaagctctgcgtcgaggcggggatgcccgccgtcgcg
ctgaccgataccaacagcatgttcggtgcgctcgagttttccaccttggcgagcggagca
ggcgtgcagcctatcgtcggctgtcaggtgtcgttgctgacaggggcggctgcgcccggc
cagaaggcccgccgcaccgcgccgctcgtgttgctggcgcagaacgaggcaggctaccgg
aacctgatgaagctctcctcctgtctctatctggatgcggggggcgagctgccgtccgtc
accttggaggagctggcgacccatgccgaggggctgatctgcctgaccggcgggccggag
ggtgcggttggccagcatctgatcgccggtcaccgcgacaaggcggagctgctgctggag
caactggcgcgcatctatcctgaccgtctgtatgtggagctccagcgccatccgggagag
ggcggagctcctgcggcggcagagcgcgcgacggagcggggtttcgtggaaatggcctat
gccatggacctgccgcttgtcgccaccaacgacgtctatttccccaagaccgagatgtac
gaggcgcatgatgcgatgatctgcatcgcggacggcgcctacgtcgatcagcaggagccg
cgccggaggctgacgccgcagcattacttcaagtccgaggcggagatggtcacgctcttc
gccgatctgcccgaggcggtggagaatacggtggagatcgcccgtcgctgcgcgttcaag
gtgaagaagcatccgcccatcctgccgcgctttgccgatgacgaggtggaggaattgcgc
cgtcaggcgtggaacgggctgcgcgatcggctggcggtgatcccgcattccgcgagcgtc
gcggaatatgaggcgcggctgaccttcgaactcgacatcatcgagcagatgggcttcccc
ggctacttcctgatcgtcgccgacttcatcaaatgggccaagcaacgcgacattccggtc
gggccgggccgggggtcgggagcgggcagcctcgtcgcctatgcgctgaccatcaccgac
cttgaccccctgcgctacagcctgctgttcgaacgcttcctgaacccggaacgggtgtcg
atgccggacttcgacatcgacttctgcatggatcggcgggaggaggtcatccgctacgtt
caggagaaatacggccgcgacaaggtgggccagatcatcacctttggcgccctgctgtcg
aaggccgcggtgcgcgacgtgggccgggtgctccagatgccctatgggcaggtggaccgg
ctgtcgaagatgatcccggtggagggggtgaaacccgtctccatcgccaaggcgctggcc
gatgagccgcgcctgcgcgaagcggcgaagacggaggaggtcgtggcccgcctgctgcgc
tatgccgagcagatcgagggactgctgcgcaacgcctccacccatgccgcgggggtggtg
atcggggatcggccgctcgacgcgctggtgccgctttatcaggatccgcggtcggacatg
ccggccacccagttcaacatgaaatgggtggaagcggccgggctggtgaagttcgacttc
ctcgggctgaagacgctgaccgtgatccagaacgccatcgacctgatccttgcgggcggc
ggtgagctgcaccgctccgccgacggccgggcgctttacgccccgaaggagggggctgcg
aacgatatcgggcatatcccgctggacgacgtgccgacctatgagctttatgcctccgcc
aagacggtcgcggtgtttcaggtggaaagctccggcatgatggatgcgctgcggcgcatg
aagcctacctgcatcgaggatatcgtggcgctggtcgcgctctaccggcccggtccgatg
gagaacatccccacctattgcgaggtgaagaacggcctccggccgatcgagtcgatccat
ccctccatcgaccatatcctggcggagacgcagggcatcatcgtctatcaggaacaggtg
atgcagatcgcgcaggtcatggcgggctacagcctgggcggtgcggacctgctgcgccgc
gccatgggcaagaagatcgccgaggagatggcgaaggagcggcccaagttcgtcaacggt
gccgtggcgaacggcgtcgacacgaagaaggcgggcgaggtcttcgacctgctggagaaa
ttcgcgaactacggcttcaacaagtcgcacgccgccgcctatgccgtggtgagctaccag
accgcctggctcaaggcgaaccatccggtggagttcatggcggccgtcatgaactgcgat
atccacctgaccgacaagctgaacgtctacaagcgtgaggtcgaccggctggggatcgag
acggtgccgccctgcgtcaaccgttcgcttgccaccttcagcgtgaaggacggccgtgtg
gtctatgcgctgggtgccctgaagaacgtcggggtggaggcgatgcgcgccatcgtcgag
gcgcggggcgacaagcccttccgcgacctgttcgatgttgcccgccgggtggacctgaag
cgcatcggcaagcggccgctggagatgctggcacgggcaggggccttcgacacgcttgac
cgcaaccgtcgccgggtgttcgacagccttgatgcgctggtcgcttggtccgccgcggtg
cacgaggcgcgcgtctcggcacaggtgtcgctgttcggggaggcgggagacgatctgccg
gagccgcgactggtgaactgcgatgattggctgcccgtggagcggctggcggaggaacat
caggccatcgggttctatctctccggccaccccttggacgactacatgccttcgctgaaa
cgcaagggcgtgctcacgctggaagcgctgtcccggcaggccgagcgtggcccgaccgtg
gcgaagctggcggggtccgtctcctcccggcaggaaaggaaatcggccaaggggaaccgt
ttcgccttcgtgcagctttccgatccgacaggactatacgaggtgacggtgttttccgag
acgttggaggcgacgcggcagtttctggagcctgggtcggcgatcgtgctgacggtagag
gcgacgatggaggccgacaccctgaaactgttggcgcggggcgcggcgcccatcgacggt
gtggtggccgatgcaggaaccgccgggcttcgcatccatctggaggaagcgcgcgccgcg
cggtccgtcgccgcgctgttcgagcggatggcggagcagcgcatccgctcccgcgcaccg
atcgaattctgtgtgaccgacccggaaacgggcagggagatcgtcattcgtcttggcgat
gactatccggtatctccgcagatcaagggcgcgatcaaggccatcggaggggtgagcctt
gtcgaggaagtctga
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