Haematobacter massiliensis: HmaOT1_13035
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Entry
HmaOT1_13035 CDS
T05861
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hml
Haematobacter massiliensis
Pathway
hml00521
Streptomycin biosynthesis
hml00523
Polyketide sugar unit biosynthesis
hml00541
Biosynthesis of various nucleotide sugars
hml01100
Metabolic pathways
hml01110
Biosynthesis of secondary metabolites
hml01250
Biosynthesis of nucleotide sugars
Module
hml_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HmaOT1_13035 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HmaOT1_13035 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HmaOT1_13035 (rfbC)
Enzymes [BR:
hml01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HmaOT1_13035 (rfbC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF2835
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
QBJ25411
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All DBs
Position
2303827..2304390
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AA seq
187 aa
AA seq
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MQIEETALPGVVIITPKRFGDDRGYFSETYNLKALSELGISTPFVQDNQSLSRQVGTIRG
LHFQRPPHAQAKLVRVLQGRILDVAVDARKGSPHYGKWVGVELSAEDGRQLLIPAGFLHG
FVTREPDTLVFYKCSDYYAPDCDGAVRFDDSDIGIDWGISPDDAVLSAKDAAAPAFADFD
SPFPYTE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgaggagacggccctccccggggtcgtaatcatcacacccaagcgatttggc
gacgaccgcggttatttttccgagacatataacctcaaggccctgtccgagctggggatt
tccacgcccttcgtgcaggacaatcagtccctctcacgccaggtcggcaccatccgcggc
ctgcacttccagcgtccgccccatgcgcaggcgaaactggtccgtgtgctccagggccgg
atccttgacgttgcggtggacgcccgcaagggttcgccgcattacgggaagtgggtgggg
gtggagctttcggccgaggatggtcgtcagctgctgatccccgcaggcttcctgcatggt
ttcgtcacgcgggagccggacacgctcgtgttctacaaatgctcggactattacgcgccc
gattgtgacggcgccgttcggttcgacgattccgatatcggcatcgactggggaatatcc
ccggatgacgccgtgctttcggccaaggatgcggccgcgcccgcctttgccgatttcgac
agcccgttcccctacacggagtga
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