Haematobacter massiliensis: HmaOT1_14865
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Entry
HmaOT1_14865 CDS
T05861
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hml
Haematobacter massiliensis
Pathway
hml03420
Nucleotide excision repair
hml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HmaOT1_14865
03430 Mismatch repair
HmaOT1_14865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hml03400
]
HmaOT1_14865
Enzymes [BR:
hml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HmaOT1_14865
DNA repair and recombination proteins [BR:
hml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HmaOT1_14865
MMR (mismatch excision repair)
Other MMR factors
HmaOT1_14865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_16
AAA_12
AAA_11
HHH
Motif
Other DBs
NCBI-ProteinID:
QBJ25623
LinkDB
All DBs
Position
pOT1-1:complement(229499..231502)
Genome browser
AA seq
667 aa
AA seq
DB search
MGYLEKLNDRQRQAVEHGTGPLLVIAGAGSGKTSTLAHRVAHLLVQGADPRRILLMTFSR
RAAAELTRRVERIAAAALPIGYAADALTWAGTFHGIGARLLREYAPQIGLTPDFTIHDRE
DSADLMNLSRHGLGLSRTEARFPGKGTCLAIYSRTVNSGEDLSDVLKRHFPWCATWETEL
KRLFAAYVAAKQAQNVLDYDDLLLAWAEIMQEPAFAAHIGAMWDHVLIDEYQDTNRLQSR
ILQALKPDGKGLTVVGDDAQSIYAFRAATVRNILDFPDAFTPPAAVVTLERNYRSTQPIL
TAANAVIAEARERFSKTLWSDRASAEKPRLVTVANELDQARHVVDQLLANREEGMRLKDQ
AVLFRTSSHSGQLEVELTRRNVPFVKFGGLKFLDSAHVKDVLAVLRFGQNPRDRVAGFRA
LQLLPGLGPGTAGKVLDAMAGAPQPLQALADFPVPPRVAGWAELVQTLQPLGWPDALSRA
RLWYEPHLDRLHEDAEFRRADLLQLEQIAMAYPSQERFLTDLTLDPPDATSGPAGVALKD
EDYVILSTIHSAKGQEWRSVFVLNAVDGCIPSDLGAGDTAELEEERRLLYVAMTRAKDRL
ALGIPLRFYVTQQSRNGDRHLYAARSRFITRQMLEHFEVTYWSPPTAVHAAPPPRIDIAR
KMRGMWE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgggatatctggaaaaactgaacgaccggcagcggcaggcggtggagcatgggacgggg
ccgcttctcgtcatcgccggggcaggatcgggcaaaaccagcacgctcgcgcatcgcgtg
gcgcatctgctcgtgcagggcgccgatccgcggcggatcctgctcatgaccttttcgcgt
cgcgcggcagcggagctgacacggcgggtcgagcggatcgcggccgccgctctccccata
gggtatgccgcggatgcgctgacctgggccggaacctttcacgggatcggcgcgcggctt
ctgcgcgagtatgcaccccagatcggcctgacaccggatttcaccatccacgacagggag
gattcggccgatctgatgaacctctcccgccatggcctcggcttgtcgcgcacagaggcg
cggttccccggcaagggcacctgccttgcgatctactctcgcacagtcaattcgggggaa
gatctctcggacgtcctgaaacggcatttcccgtggtgcgcgacctgggagacggaactg
aagcggctttttgcagcctatgtcgcagcaaaacaggcgcagaatgtgctggattacgac
gacctgctcctcgcctgggccgagatcatgcaggagcccgcctttgccgcccatatcggc
gcgatgtgggatcacgtgctgatcgacgaatatcaggacaccaaccgcctgcaatcgcgc
atcctgcaagcgttgaaacccgatggaaagggattgacggtagtgggcgacgatgcccag
tcgatctatgcgttccgtgcggcgaccgtgcgcaatatcctcgacttccccgacgctttc
acaccgcccgccgccgtggtgacgttggagaggaactacagatcgacgcagcccatcctt
acggcggcaaatgccgtgatcgccgaggcgcgcgagcggttcagcaagaccctctggagc
gaccgcgcctccgccgagaagccccggctcgtcactgtcgccaacgagctggatcaggcg
cggcatgtcgtcgatcagcttctcgccaatcgggaggaggggatgcgcctcaaggatcag
gccgtgctgttccgcacctccagccattccggtcagctggaagtggagctgacccggcgg
aacgtgccattcgtgaaattcggcggtctgaagtttctcgactcggcgcatgtgaaggat
gtgcttgccgtgctccgcttcgggcagaacccccgggacagggtggcgggattccgggcg
ctgcagcttttgcccggcctcgggccgggaaccgcggggaaggtgctggatgcgatggcc
ggagcgccgcagccgctgcaggcgctggccgactttccagttccgccccgcgtggcgggg
tgggctgaactggttcagaccctgcagcccctcggctggccggacgcattgagccgtgcc
cggctgtggtacgagccgcatctcgaccggctgcacgaggatgcggaattccgccgcgcc
gatcttcttcaactggagcagatcgcgatggcctacccctcgcaggagcggttcctgacc
gacctcaccctcgatccgccggatgccaccagcggtcccgccggcgtggcactgaaggat
gaggattacgtgatcctctcgaccatccattccgccaaggggcaggaatggcgctccgtc
tttgtgctgaacgcggtcgatggttgcatcccctccgatctcggggcgggcgataccgct
gaactggaggaggagcgccgcctgctctatgtcgccatgacgcgtgcgaaggaccggctg
gcgctgggtattccgctcaggttctatgtcacccagcaaagccgcaacggagaccgacac
ctgtatgctgcccgctcccgtttcatcacccggcagatgctggagcatttcgaggtgacc
tactggtctcccccgacggccgtacatgccgctccaccaccccggatagacattgcccgc
aagatgcggggaatgtgggagtag
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