Haematobacter massiliensis: HmaOT1_14875
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Entry
HmaOT1_14875 CDS
T05861
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hml
Haematobacter massiliensis
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hml03000
]
HmaOT1_14875
Transcription factors [BR:
hml03000
]
Prokaryotic type
Helix-turn-helix
Other families
HmaOT1_14875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
AAA_lid_14
HTH_8
Sigma54_activ_2
HTH_23
HTH_28
HTH_IclR
HTH_30
HTH_29
HTH_50
IclR_C
HVO_A0261_N
HTH_20
Xre-like-HTH
HTH_1
AAA_5
HTH_Tnp_ISL3
MerR
GAF_2
MarR_2
HTH_17
HTH_38
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QBJ25624
LinkDB
All DBs
Position
pOT1-1:233692..235539
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AA seq
615 aa
AA seq
DB search
MEDLHHIREIEEVSRGRAGQRAPVVVQSWLRCLNQHRLDPAARSEAYILPDSALRLHRQR
SEDLIAIARSGIEHLYSLVAGQNYVLMLADSAGVTVEYLGDPGQKAALRRSGLYLGAEWS
EERAGTCALGACIATGEPLIIHQSDHFDLAHTGLSCTAAPIYDTGGRLAAVLDISLLSSP
LPRASQSLALNLVRQSARRIEMANLMAESRREWVLRLSAGADFLDVDPEDAVSLDTAGRV
IGMTNGAARVMARAAGLDWRGSEALIGRPISDFLDISLDRLEGLTRQRQAAERFVETRDG
HRLFAHAIEPRPAPLRAPPRPERLPPGLRGLAGGDPVMELALGRVAALAPSPLPLLIEGE
TGTGKLTLARAIHALAGRGPLVVLPCAGLAEEDGALLFGRAGERGGGMIAEAGGGTLVLD
KVEELPPGLQRRFLRLAAEDGAVPVGGTRAEPLPLRIIATSQCDLGQAAVEGRFRADLFH
RLNGALIRLPALRHRQDLLWLAERAFTEAFASPPPLSVEVLEALSRYDWPGNLRELGHLA
RSLAITAAGRSVLPSDVPRAGAHAPPHAEGEAARLLRALDASGGNISEAARRLGVNRSTI
HRQMHRFGLKGGAGH
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaggatctccaccacatccgcgagatcgaagaggtctctcgcggcagggccggacaa
cgcgcgcccgtggtcgtgcaaagctggctgcgctgcctgaaccaacaccggctggatccg
gcggctcggtcagaggcctatatcctgcccgacagcgcgctccgcctgcacaggcagcga
tccgaggatctcatcgccatcgcgcggagcggtatcgagcatctctattcgctggtagcg
ggccagaactacgtgctcatgctggccgatagtgcgggtgtgaccgtggaatacctcggc
gatcctggacagaaggcagcgttgcgccgaagcgggctgtatctcggcgcggaatggtcc
gaggaacgggcgggcacctgcgcgctcggcgcctgtatcgcgacgggagagccgctcatc
atccatcagagcgatcatttcgacctcgcgcataccgggctgtcctgcacagccgcgccg
atctacgataccggcgggcggctggcggcggtgctcgacatatcgctcctttcctctccg
ctgccacgggccagccagtctcttgccctgaacctggtccggcaatctgcaaggcggatc
gagatggccaacctgatggcagagagtaggcgcgaatgggtgctgcggctctccgcgggc
gccgatttcctggatgtggacccggaggatgcggtgtcacttgacacagccggtcgagtg
atcggcatgaccaacggagcggctcgggtgatggcgcgggcggcggggctggactggcgc
gggtcggaggcgctgatcgggcggccgatctcagactttctggatatctcgctggaccgg
ctggaggggttgacccggcagcgacaggcggcggagcggttcgtggagacgcgggacggt
catcgcctgttcgcgcatgccatagaacctcggcccgcgccgcttcgggcgccgccacgg
ccggagcggctgccgccgggccttcgcgggcttgcaggcggggatccggtgatggaactg
gcgctcggccgcgtggcggcgcttgccccctcgcccctgccgctgctgatcgagggggag
accggcacgggcaagctgacgctcgcgcgtgccatacatgcgctggcggggagggggccg
ctggtcgtgctgccctgcgccggactggccgaggaggacggcgcgttgctctttggccgg
gcaggggagcggggcggcgggatgatcgcggaggccggcggcggtaccctggtgctcgac
aaggtggaggaactgccgcccggattgcagcgccggtttcttcgcctggcggcggaggat
ggcgccgtccccgtcggcgggacacgggccgagccgctgcctctgcggatcattgcgacg
agccagtgtgatctcggtcaggcagcagttgaggggcgcttccgggcggatctgttccac
cggctgaacggcgcgctcatccgcctgccggccctgcgccatcggcaggatctcctctgg
ctggccgagcgcgccttcacggaggccttcgccagcccgccacccctctccgtcgaggtg
ctggaggcactgtcccgctatgattggccggggaacctccgtgagcttgggcatcttgcc
cggtcgctggcgatcaccgctgcggggcggtcggtgctgccttcggacgtgccgcgcgct
ggggcccatgcgccgccgcatgcggagggggaggcagcccgccttctccgcgcgctggat
gcctcgggcggcaatatctcggaggcggcgcggcggctgggggtgaaccggtctaccatt
catcgacagatgcaccgcttcgggctgaagggcggagcggggcactga
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