Haematobacter massiliensis: HmaOT1_15620
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Entry
HmaOT1_15620 CDS
T05861
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hml
Haematobacter massiliensis
Pathway
hml03030
DNA replication
hml03430
Mismatch repair
hml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HmaOT1_15620
03430 Mismatch repair
HmaOT1_15620
03440 Homologous recombination
HmaOT1_15620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hml03032
]
HmaOT1_15620
03400 DNA repair and recombination proteins [BR:
hml03400
]
HmaOT1_15620
Enzymes [BR:
hml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HmaOT1_15620
DNA replication proteins [BR:
hml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HmaOT1_15620
DNA repair and recombination proteins [BR:
hml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HmaOT1_15620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBJ25776
LinkDB
All DBs
Position
pOT1-2:complement(17464..18357)
Genome browser
AA seq
297 aa
AA seq
DB search
MTSSDHLETLAQALEATGDYRVIRRLKPRPRIVPPPGTPLRLGLVVDVETTGLDPQRDEI
IELAMTPFNYGLDGTIFSVGDSFQGLRQPSKPIAPEITAITGITNEMVAGQIVDPAAVAS
FAAPASLVIAHNAAFDRRFLERFNDVFSTKPWACSLSQIDWAAEGFEGTKLAYLAQAAGF
FYDRHRAMHDCLATVELLAMWLPRSGATGLSRLLDGARTVSWRIWAENAPFDLKDVLKAR
GYRWNGDPGPQPRAWYIDVPEAQCEAELRFLRTEIYRYEVDPPVRRIDAYDRFSDRI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttctgaccatctggagaccctggcgcaggcgctggaggccacgggagactac
cgggtcatccggcgtctcaaaccgcgccctcgcatcgttcctccgccaggcacgccgctg
cgcctcggcctggtggtcgatgtggagaccacggggctcgaccctcagcgcgacgagatc
atcgaactcgccatgacaccattcaactacggcttggatggcaccattttcagcgtgggc
gacagcttccaagggctgcgtcagccgagcaagcctatcgccccggaaatcaccgcgatc
acgggcatcaccaacgagatggtggccggccagattgttgatcccgcagcggtagcctca
ttcgcagcgccggcttcgctcgtcatcgcgcacaatgcggcgttcgaccgccgcttcctc
gaacgattcaacgacgtgttctcgacgaagccgtgggcatgctcgctcagccagatcgat
tgggcagcagaggggttcgagggcacgaaactcgcctatctcgctcaggccgccggcttc
ttctacgaccgccaccgcgcgatgcacgactgtcttgctacggtcgagttgttggcgatg
tggctgccccgatctggcgctacaggtctcagccgtctcctggacggcgctcgtaccgtt
tcttggcgaatctgggcggagaacgcgccctttgacctcaaggatgtccttaaagcgcgg
gggtaccgctggaacggcgatcccggcccgcagccgcgcgcctggtatattgacgttccc
gaggctcagtgcgaggccgaactacggttcttgagaacggaaatctatcggtatgaggtc
gatcccccggttcggcggatcgatgcttatgatcggttttcagacaggatctga
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