Haematobacter massiliensis: HmaOT1_15900
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Entry
HmaOT1_15900 CDS
T05861
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hml
Haematobacter massiliensis
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hml03400
]
HmaOT1_15900
Enzymes [BR:
hml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HmaOT1_15900
DNA repair and recombination proteins [BR:
hml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HmaOT1_15900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QBJ25829
LinkDB
All DBs
Position
pOT1-2:77046..79592
Genome browser
AA seq
848 aa
AA seq
DB search
MHYPFLVTDPRSDLQYRLTDTGLAELSLAPISAEWAPGRAIAEAPNPVWAESLANAPVET
ISAVTAALTDLVLATPDLKVPNVDHLPDSRAKRHLLALVALWQRLGDALPEGLAPISHVL
ALPHGSFLGSLPVVEGSLDPLAPAALQALFARLRDEFGTVPASAYTPRAAIGSRLHALQG
GVSAQDIEAGVLDDSLAFYGLRDPAACADFAAAKARALIESGVSAREIAVLSGDDLRQIA
RAFSAQGVPLSGLPGQLPERDVIGETALHLALAKRPPTPAMVLASLALSPLMPWSAQTGR
DLAEGLMNGDFRGTILTGTPAHKELWDDIRASAGSLQQLRFLLDRICERIGQGDQVRARL
TVPPGEGSPDWEAILRGIQVMPPTVADPDRNLEGASLWSAFETPWRPCRHLIVSDFTDGL
YPTRPRANPLFLDSEIAAIRDATGLQLRGRAEGLAQGLQIFDQQLQVVSESVTFLIPWRD
LAGGRLQPSAGLSLVARAVAGVEDASDLIIDLSRLNPADWPVAYHTLIPMPEPADLPEAL
DFPGHDLLSLRRRVDGTAKPQSPSRLETLLVSPLAWLLAEVGAEDMSWSAEELDVMAKGN
IAHDVFENVFLKDQPIPEPEALATAIPEAYGRALTRHAGYLRSPSWEMERRGLEREIMAA
ALRWRDHLLALKARIIGNEIWLAGEAHGINLHGKADAILELPDGALLIVDHKKSGTKGRR
QRMEAGWDLQAGLYADMIARPTRREGDGMVPLIGRKVAVAYHLMNDGGLLTSGLALPEGS
PARDMGDAVNAGAVAKLAERLAELGAGRVVLNTTEDATFFRNEAGFVPYALTDGSALVTA
FIRPVEEE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcactaccccttcctcgtcactgatccgcgctccgacctgcaataccgcctgaccgat
accggtcttgccgaattgtcccttgcccccatttctgccgaatgggcgccggggcgtgcc
attgccgaagcgcctaacccggtctgggccgaaagtcttgccaatgcgcctgtcgagacg
atctcggcggtgaccgccgcgctgacggatcttgtgctggccacgccggatctgaaggtg
ccgaacgtcgatcacctgccagacagccgcgcaaagcggcatctcttggcgctggtcgcg
ttgtggcaaaggttgggggatgcgctgccagaggggctggcaccgatttcccatgtgctg
gccctgccgcatgggtcgttcctgggctcgttgccggtggttgaaggttcgctggatcct
ctagctcctgcggcgttgcaggcgctttttgcccggttgcgggacgagttcggcactgtt
cccgcaagcgcctatacgccccgggccgcaatcggcagccgtctgcacgcgttgcagggc
ggtgtttcagcgcaggatatcgaggccggggttctggatgacagcctcgcgttctatggt
ctgcgcgatcccgccgcctgcgccgatttcgccgccgccaaagcccgggcgctgattgag
tccggcgtttcggcccgtgaaatcgccgtgctgtcgggcgatgatctgcgccagatcgcg
cgcgctttctcagcccagggagtgccgctctcgggccttccgggccaattacccgagcga
gatgtcattggcgagaccgcgctgcatctggccctcgcgaaacgcccgccgaccccggct
atggttctggcgagcctcgcgctttctcccctgatgccctggtccgcccagaccgggcgc
gatctcgcagaaggtctgatgaatggcgatttccgagggaccatcctcactggcacgccc
gcgcataaggaactgtgggacgatatccgcgcttcggccggcagcctgcagcaactgcgc
ttcctgctggaccggatctgcgagcggatcgggcagggcgatcaggtgcgcgcgcggctg
accgtgccgcccggcgagggaagccccgattgggaggcgatcctgcgtggcattcaggtc
atgccgcccacggttgcggaccccgaccgcaatcttgaaggcgccagcctttggtctgcc
ttcgagacgccctggcgcccgtgccgccatttgatcgtcagcgatttcaccgacgggctc
tatcctacccgtccgcgcgccaatccgctgtttctcgacagcgagattgcggcgatccgc
gatgccaccggccttcaactccgtggcagggccgaagggttggcgcagggccttcagatc
tttgaccagcagcttcaggtcgtatccgaaagcgtcacattcttgatcccctggcgcgat
ctggcaggcgggcgcttgcaaccctcggcggggctgtcgctcgtcgcgcgggcggtggcg
ggcgtcgaggatgccagcgatctgatcatcgatctgtcacggctgaacccggcggactgg
ccggtcgcatatcacacactgattccgatgccggaacctgcggacttgcccgaggctctc
gatttcccggggcatgaccttctgtccctgcggcggcgcgttgacggcaccgccaaaccg
caatcgccttcgcggctcgagacgctgctggtcagccctctcgcctggcttctggccgag
gtcggggccgaggatatgtcctggtctgccgaggaactcgacgtgatggccaagggcaat
atcgcccatgatgtctttgaaaatgtctttctcaaagaccaaccgatccccgaaccggag
gcgctggcaactgccatccccgaggcctatggccgggcgctgacccggcacgcgggttat
ctgcgcagcccctcatgggagatggagcgtcgcgggctggagcgtgagatcatggcggcg
gccctgcgctggcgcgaccatctgcttgcgctgaaagccaggatcatcggcaatgaaatc
tggctggccggtgaggcgcatggcatcaatctgcacggcaaggccgatgcgatccttgaa
ttgcccgacggcgcgctcctgatcgttgaccacaagaaaagtggcacaaaagggcggcgg
cagcggatggaggcgggctgggatctgcaggccgggctttacgccgatatgatcgcccgg
cccacccggcgcgagggggacgggatggtgcccctgatcggccgcaaggtggcggtggcc
tatcatctgatgaatgacggggggctgctgacgtcgggtctcgctttgcccgaggggtcg
cccgcccgcgacatgggtgacgcggtgaacgccggcgcggtggccaagctggcggaacgg
ctggccgaactcggcgcaggccgggtcgtgctgaacaccaccgaggatgccacatttttc
agaaatgaggcaggctttgtcccctatgcgctgaccgatggctccgcccttgtcaccgcc
ttcatccgcccggtcgaggaggaatga
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