Haematobacter massiliensis: HmaOT1_15905
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Entry
HmaOT1_15905 CDS
T05861
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hml
Haematobacter massiliensis
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hml03400
]
HmaOT1_15905
Enzymes [BR:
hml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HmaOT1_15905
DNA repair and recombination proteins [BR:
hml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HmaOT1_15905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QBJ25830
LinkDB
All DBs
Position
pOT1-2:79589..82792
Genome browser
AA seq
1067 aa
AA seq
DB search
MTMAPNADHGLVIVPAGAGAGKTHRIKTQLSDWVKRGIVRPERILAVTFTEAAAGELRER
IRAGLLADGLVAEAMAVERAYVSTIHGLGLRLLTEHALAAGASPQPRHLGDAERDLLIRQ
ALAHAKALDPIKAEPERFGYAPNFVKGETVEDSLRGRVLSMIDLLRSLGDKGRDPGLIAT
ALARLDAVYGPVLEDPAAAGASLETAVQAMITAFPEGGMATVAAKGPKETLEKNLALFRR
VARDPGLLALDWGIWQNLRGLFTSNSRTKTPDGYDDLATAIMAAADVLPSHPGPLEDAKL
HLSCLIACAQEVMAAYEARKKALGLIDFADMITGAERLLRTDPTVRQAVLDEIDCVIIDE
FQDTNPVQFALLWQLGQHAPRTLLVGDVKQSIMGFQGADPRLSQALAAANPDATQPLDRN
WRSTPAVMQFVNAMGAGLFGAGYNPLAPTRDPVAGPAIEVLNATQGRRSQKYSQPPEHIA
ERIARILTDTETITDRHTKAARPARPSDIALLVCRHTTAARYAEELRARGVPVRIAEDGW
AKSPVIVAARAALAFAANPADIHGGLLLRTLGPDPLPLQEALSAQMEGRLVDDPVLMRLA
ALSNLLARLPAGAALDLVLDAAGLRLWAERQPDAAQSRADLLRLEAEAGEFEAAHRDLKS
ASGFHGETAKVFLGWLDARGGERDFDRHPDPSANSAEAVEIVTWHASKGREWPITVVAEF
DYGIEERAGTTATRFDALDRIDDMAVVLGSASLIHTPGFAAPEATRRFIEDRRADFETNA
KNLLYVALTRARDRMVLEWPGFLKDREEDAPEATNLFHILSDTCAPQIGAGSLRINGVDC
PALITQLPEEAGFTEYAGGAAASALRFGAAAPLPVTPLTPWRLQPSQTRSAGVPPVSRRI
NIGAPWPKALNDAYRGTALHLALRTYLTRPDLAPALALATGLDDATLALVAERATALKAW
LADQGYTDLRAEIPVLGHTPEGAEIPGALDLLAIGPAGAMLIDHKSGGGGDGFGPYWPQL
SSYAGLLAGLYPQHPLQGVAVFWVDHGWLELADEGASAGAFAQARVN
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggcccccaacgcagatcatggtctggtcatcgtccctgcaggcgccggcgcc
ggcaagacccaccgcatcaagacccagctctcggactgggtgaaacgtggcatcgtccgg
cccgagcgcattcttgccgtgaccttcaccgaggctgcggcgggcgagcttcgcgagagg
atccgcgccggccttttggccgatgggctggtggccgaggcgatggcggtggaacgcgcc
tatgtctcgaccatccacggcttgggcctgcgccttctgaccgaacatgcactggcggcg
ggcgcctcgccgcagccgcgtcatttgggcgatgccgagcgtgatctcttgatccggcag
gcgctggcccatgccaaggcgctggacccgatcaaggccgaacccgagcggtttggctat
gccccgaacttcgtgaagggcgagacggtcgaagattcgttgcgcggccgggtgctgtcg
atgatcgacctgctgcgcagccttggcgacaaggggcgtgaccccggcctgatcgccacg
gcgctggcgcggctggatgcggtttatggcccggtgctggaggaccctgcggcggctggc
gcctcactcgagaccgccgttcaagccatgatcactgccttccccgagggcggcatggcc
accgttgcggccaaaggtccgaaggaaacgctggaaaagaacctcgcgctttttcggcgg
gtggcgcgtgatccggggcttttggcccttgactggggtatctggcagaacttgcgcggg
cttttcacctcaaacagccgcacgaaaacgcccgacggctatgacgacctcgccacggcc
atcatggcggcggcggatgtcctgccctcgcatcccggcccgcttgaggatgccaagctg
cacctgtcctgcctgatcgcctgcgcgcaagaggtgatggcggcctatgaggcccgcaaa
aaggcgctcggcctgatcgacttcgccgatatgatcacgggggccgagcggctcttgcgc
accgaccccaccgtgcgtcaggcggtgctggacgagatcgactgcgtcatcattgacgaa
ttccaggacaccaacccggtgcaattcgcgctgctgtggcagcttggccagcacgcaccg
cgcaccctgcttgtgggcgatgtgaaacagtcgatcatgggctttcagggggccgatccg
cgcctgtcgcaggcgcttgcggcggctaaccccgatgcgacccagccactcgaccgcaac
tggcgctcgacgccggccgtcatgcaattcgtcaatgcgatgggggcgggcctctttggc
gcgggctataacccactggcaccgacccgtgatccggtcgcaggtcccgcgatcgaggtg
ctgaacgctacgcagggacggcgctcacaaaagtattcgcagcccccagaacacatcgcc
gagcgcatcgcccgtatcctgactgatactgagactatcaccgaccgccacacgaaggcc
gcccgaccggctcggccctcggatatcgcgctgttggtctgtcgccacaccaccgccgcc
cgctatgccgaggaactgcgcgcgcgcggcgttccggtgcggatcgccgaggatggctgg
gcgaaaagtccggtgattgttgccgcccgcgccgcgctggcctttgccgccaatccggcg
gatatccatggcgggctgctcttgcgcacgcttggcccggacccgctgcccttgcaggag
gcgctatccgcccaaatggaagggcggttggtggatgacccagtgctgatgcggctcgcc
gctctgtcgaaccttttggcccgcctgccggcgggtgcggcccttgatctggtgttggat
gccgccggcctgcgcctctgggccgaacgtcagcctgacgccgcccaatcccgcgccgat
cttttgcggctagaggctgaggcgggtgagttcgaagccgcgcatcgcgatctcaaatcc
gcctcggggttccacggcgagactgccaaggtctttctcggctggctcgacgcccgtgga
ggcgagcgcgatttcgaccgtcatcccgatccttccgccaacagcgccgaggccgtggag
atcgtcacctggcatgcctccaaagggcgggaatggccgatcactgtcgtcgcagagttc
gactatggtatcgaggaacgtgcggggaccactgcgacccgtttcgatgccttggaccgc
atcgacgatatggcggtggtgctggggtccgcgagcctgatccacacgcccggctttgcc
gcgcccgaggcgacccgccgtttcatcgaagaccgccgcgccgattttgaaaccaatgcg
aaaaaccttctctatgtcgccctgacccgtgcccgtgaccggatggtgctggaatggccg
ggttttctgaaggaccgcgaagaagacgcgcccgaggctacgaacctgtttcatatcctg
tccgatacttgcgcgccgcagatcggggcgggcagcctgcgtatcaatggcgtggattgc
ccagcgctgatcacgcaactgcctgaagaggcgggatttaccgaatatgcaggtggtgcg
gcagcatcagcgctgcgattcggtgccgctgcgccgttgcccgtgacaccgctgacgccc
tggcggctgcagccctcgcaaacccgtagtgcgggggtgccgcccgtgtcccgccgtatc
aacatcggagcaccctggccaaaggcactgaacgatgcctaccgcggcacagcactgcat
ctggcgctgcgcacatacctgacccggcccgatctggccccggctttggctctcgcgacc
gggcttgacgacgccactcttgcgctagtggccgagcgtgccacggcgctgaaagcctgg
cttgccgatcagggctatacggatctgcgcgccgagattccggtgcttggccacacgccc
gaaggtgcagagatccccggtgccctcgaccttcttgccatcggcccggcaggcgcgatg
ctgatcgaccataaatccggcggcggcggtgacgggtttggcccctattggccacagctt
tctagctatgccggactgttggccggactatacccgcagcatccgctgcagggcgtggcg
gtgttctgggtcgatcacggttggctggaactggcagatgagggcgcgtcagcgggagct
ttcgcacaggccagagttaactga
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