Haematobacter massiliensis: HmaOT1_15940
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Entry
HmaOT1_15940 CDS
T05861
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hml
Haematobacter massiliensis
Pathway
hml03420
Nucleotide excision repair
hml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HmaOT1_15940
03430 Mismatch repair
HmaOT1_15940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hml03400
]
HmaOT1_15940
Enzymes [BR:
hml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HmaOT1_15940
DNA repair and recombination proteins [BR:
hml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HmaOT1_15940
MMR (mismatch excision repair)
Other MMR factors
HmaOT1_15940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
RTX
Motif
Other DBs
NCBI-ProteinID:
QBJ25836
LinkDB
All DBs
Position
pOT1-2:94115..95959
Genome browser
AA seq
614 aa
AA seq
DB search
MVAGAGSGKTTSLIKGLASILAIHGERLRLRRQRVACITYTEIAAGEIWADVGNNPLVHV
STIHSFLWSIARGFQQDIAAWVANRIDERITELQHDAANFDPRVQQKTRDKNARDITRYE
QQREAITQVRSFTYGTGSDYAKGILGHDDIIKMASQLMIQRPLFRTLVAQQFPFVFVDES
QDTFPVIVEALMAVQQQEQARICLGFFGDPMQRIYPTGIGTVPKPDDWRAIPKPENFRSP
TSILNLANAIRREGDDLVQIGGRKEKSGDQEVSVIGTARLFVLPTDAHRDERVAQVRAWI
SNANDDELWQPADENDPVKMLVIVHRMAAKRLGFGDLYAALNDKAPEAFKNGFLDASAWP
LRPFVSFLLPLAEAVRDARDFETMRLLRLHSPLLAKANLQGVNIAERLNELQAVSNQVGE
LMGPQSQATIRDVLTLAKESRLVEFDPRLSAYLEDVAVNEAEVEADDNLDEGEEGLSNEI
NSMAAFLACPAKQLRPYQAYVNEESPFSTQQGVKGAEFDRVLVVLDDDEGTHFQFSYEKY
LGLKELSARDKKTLQDGGETGVERTRRLFYVCCTRARQDLVVILFVADPAAAIAHIRGLG
LFPEADILSQDALA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccggcgcgggttcgggcaaaaccacttcgctgatcaaggggctcgcctcgatc
cttgccatccatggcgagcgtttgcgactacgcaggcagcgcgtggcctgcataacctat
acagagatcgccgccggagagatttgggctgacgtgggaaacaatcctctcgtccacgtc
tccacgattcatagttttctttggtccatcgcacgcggcttccaacaagatatcgccgct
tgggttgcaaataggatcgacgagcggatcacggaattacagcacgatgccgccaatttt
gacccacgcgttcagcagaaaacgcgagacaagaacgcccgcgatataacgcgctacgag
cagcagcgtgaggctatcactcaagttcgtagtttcacttatggaacaggaagtgactac
gccaaaggcatcctcggccacgatgacatcattaagatggcttcgcagttgatgattcaa
cggccgcttttccgaactctcgtcgcacaacaatttccgtttgttttcgtggatgagagc
caagatacctttcccgttatcgtcgaagcgttgatggcggttcagcagcaggagcaggcc
cgcatctgcctcgggttcttcggcgacccgatgcagcgcatctatcccaccggcatcggc
acagttcccaaacccgatgattggcgggcgatccccaagccggaaaatttccgctcgccc
acctcgatattgaacctcgcaaacgccattcggcgtgaaggtgacgatctggttcagatt
ggtggccgaaaggaaaaaagtggtgaccaggaagtgtcggtgatcggaacggcgcgattg
tttgtcttgccgactgatgctcatcgcgacgaacgcgtggctcaggttcgggcgtggatt
tcgaacgcaaacgatgacgagttgtggcagcccgccgacgagaacgacccagtgaaaatg
ctggtgatcgtgcatcgcatggcggcgaagcgattggggttcggcgatctgtatgcggcg
ctcaacgataaagcgcctgaggccttcaagaatggctttctggacgcgtccgcgtggccg
ctgcgcccgtttgtgtcgtttctactgccgcttgcggaggccgttcgggacgcgcgagac
ttcgagacgatgcggctgcttcggcttcattcgccgttgctagcaaaggccaaccttcaa
ggcgtgaacatcgccgagcggctcaatgaacttcaggcggtgagcaatcaggtcggtgag
ctgatgggacctcagtcgcaggccaccattcgtgacgtgctgacgcttgccaaggaaagt
cgcttggtggagttcgacccgcgcctgtccgcgtaccttgaggatgttgctgtgaacgag
gcagaagtcgaggccgatgacaatttagacgaaggcgaggaaggcctttcaaacgagatc
aattcaatggccgcgttcctagcctgtccggctaagcagcttcgaccctatcaggcctac
gtcaacgaggaatcgcctttttccacgcagcagggcgtgaaaggggccgagttcgatcgt
gtgcttgtcgtcctcgatgacgacgaaggcacgcactttcaattctcctacgagaaatac
cttggattgaaagagctttctgcgcgagacaaaaagactttgcaggacggcggcgaaaca
ggcgtcgaacggacgcggagacttttctacgtttgctgcacacgagcgcggcaagaccta
gtggttatccttttcgtggctgatcctgcagcggcgattgcgcatattcgcgggctcgga
ctctttccagaagcggatatcctctcgcaggatgcactcgcttga
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