Haematobacter massiliensis: HmaOT1_19375
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Entry
HmaOT1_19375 CDS
T05861
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
hml
Haematobacter massiliensis
Brite
KEGG Orthology (KO) [BR:
hml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hml03036
]
HmaOT1_19375
Chromosome and associated proteins [BR:
hml03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
HmaOT1_19375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
QBJ26502
LinkDB
All DBs
Position
pOT1-5:43563..47918
Genome browser
AA seq
1451 aa
AA seq
DB search
MTYLAPVAPPVPVPSRAPAPAILAVAEALQPDLAQGFQIDALRLRLEMERAFGGSDADGA
WDWKLAYEAGEVALVLFLRKFGRALLARAGSPATLLPLVAKVAGLLPTHTRRSEEMERFQ
QFSTPLPMGLAALAAAQITPRDLVLEPSAGTGLIAILAEIAGGSLVLNELAETRADLLRL
LFSGCPVTRFDAAQIDDHLDVGLRPSVILMNPPFSAVANVDGRTTEATARHLRSALARLA
PGGRLVAITGASFAPDAPAWSETFGRLTESAHLVFTGAVSGAAFAKHGTSFETRISVFDK
CRGGERGGSTADLARSITPDVAQLLAQIVAEVPPRLALDAGDVARTRAPFPGAPARASGY
AAGKPRAAPSASIAANVSAPDAEDLAYTLRETAEAHGAARISDAIYETFRLQAIDIPGAA
PHPTKLVQSAAMASVVPPKPTYRPKLPTAVLRDGLLSDAQLETVIYAGEAHGAHLAGFWT
VDETGDMVSAAPDDSADAIRFRRGFFLGDGTGAGKGRQSAGILLDNWCQGRRKALWISKS
DKLLEDAQRDWSALGQERLLVTPLSRFAQGRDIPLSEGILFTTYATLRSEERGAKKSRVD
QIVDWLGADFDGVILFDESHAMANAAGSKGERGDTEASQQGRAGLRLQHKLPNARVVYVS
ATGATTVHNLAYAQRLGLWGGEDFPFATRAEFVQAIEAGGVAAMEVLARDLRSLGLYTAR
SLSYDGVEYEMLEHALTPEQRGIYDAYAGAFAIIHNNLAAAMEAANITGESGTLNRQAKS
AARSAFESAKQRFFGHLLTSMKTPTLISSIEADLAAGRAAVIQIVSTGEALIERRLSDIP
TDEWNDVRVDITPRESCLDYLQHSFPVQLYEPFTDSEGNLSSRPVTRDGQPVECREAARR
RDALIEHLASLPPVPGALDQIVQRFGTDLVAEVTGRSRRIVRKGEGSAARLVVESRAGSA
NLAETAAFMDDQKRILIFSDAGGTGRSYHADLGAKNQRLRVHYLLEPGWKADAAIQGLGR
TNRTNQAQPPLFRPVATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLES
PYARDALRQLYRRLYRGDVVGCSLGAFEDATGLSLTDDNGLKDDLPPITTFLNRLLALTI
DMQAVLFSAFEELLDARIEGAIAAGVYDLGLETLRAESFRVADARVIYTHPGSGAETQLL
TIAEKRRNTPTALADALDWLDDPKARLLVNSRSGRAAVQVPATSLMLDDGTIEPRLRLIR
PTESSTVPAKIMDDTHWLEADRAAFTAAWTAELAEVPEFSESTLHIVSGLLLPIWKQLPQ
DETRVYRLQTDDGQRIIGRRVSPTWVATTLADDAPKLSAAQVHALVLEGKTVVRLAESME
LHRSRVMGVNRIELSGFTEAAKDRLKADGFFSEIISWKLRLFCPTDPTGIAVLDRLIARC
PVTGLHARKGC
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgacctatctcgcgcctgttgcgcctcccgttcctgtcccatctcgcgctcccgcgccc
gcgatccttgccgtcgccgaagccctacagcccgatctcgcccagggcttccagatcgac
gcactgcgtctgcggctggagatggagcgcgcctttggcggctccgatgccgatggcgcc
tgggactggaagctggcctatgaggctggcgaggtggcgctcgtcctcttcctgcggaaa
ttcggccgcgcgctgctggcccgggcgggctcgcccgcaacactcttgccgctcgtcgcc
aaggtggcaggcctcttgccgacgcatacccggcgctcggaggagatggagcggttccag
caattctcgacaccgttgcccatggggctggcggcgctggcggcggcgcagatcactccg
cgtgacctggtcctcgaaccttcggccgggaccggactcatcgcgatactcgctgagatc
gcgggcggtagcctcgttctgaacgaattggccgagacccgcgccgatcttctgcgtctc
cttttttcggggtgcccggtcacccgttttgacgccgcgcagatcgacgatcatctggac
gtggggctacgcccgagcgtcatcctgatgaacccgcccttctcggccgtggccaatgtc
gatgggcggacgaccgaggcgacggcccggcatctgcgctcggcgcttgcgcgccttgct
cccggcgggagattggtcgcgatcaccggcgcaagcttcgcacctgatgcgcccgcctgg
tccgagaccttcggccgcctgaccgagagtgcccatctggtcttcaccggcgccgtgtcg
ggggcagccttcgcaaagcatggcaccagcttcgagacccggatctcggtcttcgacaag
tgccgtggcggggagcggggtggcagcaccgctgatctggcacgctccatcacgccggat
gtggcgcaactcctcgcccagattgtggccgaggtccctccgcgcctcgcgttggatgcg
ggtgatgtcgctcgaacccgagcccccttcccgggagctcctgcccgtgcgtctggctac
gcggctgggaaaccgcgtgcagcgccgtcagccagcatcgcggcgaatgtctccgcgcca
gatgccgaagacctcgcctacacgctgcgcgagacggcggaggcccacggcgccgcgcgc
atttcagacgcgatctacgagaccttccgcctgcaggccatcgacatccccggcgccgca
ccgcacccgaccaagctggtgcagtcggcggccatggcgtccgttgtgccccccaaaccc
acctaccgcccgaaactccctaccgccgtcctgcgcgacggcctgctctccgacgcgcag
ctcgagactgtgatctacgcgggtgaggcgcatggcgcgcatctcgccggcttctggacc
gtcgatgagaccggcgacatggtctcggccgcgcccgacgattctgcagacgccatccgc
ttccgccgcggcttcttccttggcgacggtaccggggcgggcaagggccgccagtcggcc
gggatcctgctcgacaactggtgccagggccgccgcaaggcgctctggatttcgaagagc
gacaagttactggaggatgcgcagcgcgactggtcagcactcggccaggagcgcctgcta
gtgaccccactctcgcgcttcgcgcaggggcgcgacatcccgctttctgagggcatcctc
ttcaccacctacgccaccctgcgctccgaagagcggggcgccaagaaatcccgcgtcgac
cagatcgttgactggctgggggcggatttcgacggggtgatcctgttcgatgaaagccat
gccatggccaatgccgctgggtccaagggcgagcgcggtgacacggaagcctcacagcag
ggcagggcgggcctgcggctccagcacaagctgccgaatgcccgcgtggtctatgtctcg
gccacaggggccacgacggtccacaatctcgcctatgcgcaacgcctcgggctttggggc
ggggaggactttccctttgccacccgagctgagttcgttcaggccatagaggccggcggc
gtggctgcgatggaggtcctcgcgcgcgatctgcggtcccttggcctctacaccgcccgg
tcgctttcctatgacggtgtcgaatatgaaatgctggagcacgcgctgacccccgagcag
cgcggcatctacgatgcctatgccggggccttcgccatcatccacaacaacctcgcggcc
gccatggaggctgcgaacatcaccggagagtctggtactctgaaccgccaggccaaatcc
gctgcccgctcggctttcgagtctgccaagcagcgtttcttcggccatctgctcacctcg
atgaaaacccctaccttgatctccagcatcgaggccgatctggccgcaggccgtgcggct
gtcatccagatcgtctcgaccggcgaggcgctgatagaacgccgcctgtcggacatccct
acggatgaatggaacgatgtgcgggtggacatcacgccaagagagagctgcctggattat
ttgcagcactccttcccggtgcaactctacgagcccttcaccgatagcgaaggcaacctc
tcctcgcggcctgtcacgcgcgatggccagccggtggaatgccgcgaggccgcgcgcagg
cgcgacgcgctgatcgagcatctggcctcgcttccgccagtgcccggcgcgctggatcag
atcgtccagcgctttggcaccgaccttgtggccgaagtgacgggtcggtcacgccggatc
gtgaggaagggcgaaggttcagcggcccgcctcgttgtcgaaagccgggccggatctgcc
aacctcgcggaaaccgccgccttcatggatgaccagaagcgcatcctgatcttctcggat
gctggcggcacggggcgcagctatcacgctgatctcggggcgaagaaccagcgcttgcgg
gtccactaccttctggaacccggctggaaggcggacgcggccatacagggcctcgggcgc
accaaccgcaccaatcaggcgcagccgccgctcttccgccccgtcgccaccgatgtgaaa
gcagaaaagcggtttctctcgaccatcgcgcgccgcctagacacgctcggcgccattacc
cgcggccagcgccagaccggcgggcaggggctgttccggcccgaggacaacctcgagtcg
ccttacgcccgcgacgccctgcgccagctctaccggcgcctctatcgcggcgatgtcgtt
ggttgctcgctcggggccttcgaggatgccaccggtctcagcctgaccgatgacaacggc
cttaaagacgacctaccgccgatcacgaccttcctcaatcgccttctggcgctgacgatc
gacatgcaggccgtgctcttctcagcttttgaagagcttctcgatgcgcggatcgagggg
gctattgccgccggggtttatgacctcgggctcgagacgctccgcgccgagagcttccgc
gtcgcggatgcacgcgtcatctacacgcatcccggctccggcgcggaaacccagctcctc
accatcgcggagaagcggcgcaacacgccgactgcgctcgcggatgcgcttgactggctc
gacgacccaaaggcacgcctgctggtcaacagccgctcgggtcgggctgccgtgcaggtg
cccgccaccagcctgatgttggacgatggcaccatcgagccccgcttgcggctgatccgt
ccgaccgagtccagcacggtcccggcgaagatcatggacgatactcactggctcgaggcc
gaccgtgcggccttcaccgccgcctggaccgcggaactggccgaggtgccggagttcagc
gagtccaccctgcacatcgtgtcggggctcctgctgccgatctggaagcagctcccccag
gacgaaacccgcgtctatcggctgcaaaccgatgacggtcagcgcatcatcggtcgccgg
gtctcgcccacctgggtcgcgaccacgctggcagacgacgcgccgaagctctctgcagcg
caggtccatgccctcgttctggagggcaagaccgtcgtgcgactggccgagagcatggag
ctccaccgctcccgcgtcatgggcgtgaatcggatcgagctctccggcttcacggaagcc
gccaaggaccggctcaaggccgatggcttcttctcggagatcatcagctggaagctgcgc
ctcttctgcccgaccgaccctaccggcatcgccgtgctggatcgcctgatcgcgcgttgt
cctgtgacgggactccatgcacgcaaaggttgttga
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integrated database retrieval system
