Helcobacillus massiliensis: R3I40_00145
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Entry
R3I40_00145 CDS
T09498
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00052
Galactose metabolism
hmm00511
Other glycan degradation
hmm00600
Sphingolipid metabolism
hmm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
R3I40_00145
09103 Lipid metabolism
00600 Sphingolipid metabolism
R3I40_00145
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
R3I40_00145
Enzymes [BR:
hmm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
R3I40_00145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
WOO93042
LinkDB
All DBs
Position
29655..32732
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AA seq
1025 aa
AA seq
DB search
MSTLPIPDIHTGEGRLAPRAWLRSDAPELSLDGDWAFRFAPDGERFGEKTSIRVPGMWQL
QGHGAPQYTNFIYPFPLDVPHVPSENPTGDYLRTFELSAEWGSALADGARVFLRFDGVDS
HGQVEVNGTRLGATAGSRLTQEFDVTEALTSGENSLRVLVRQWSANSYVEDQDMFWLSGI
FRSVTLLLRPAGGLHNLTVSTDFDAAAGTGSLSIRPDLLTASVGTVISGLEEHEAAQQVP
PERIELVIEELGIRRVLTAGETTTVDMGNVEPWSAETPRLYDALVRTPSECVSVRLGFRR
VERVGERILVNGQRVVFRGVNRHEVDAVTGRTQNPANEDRDLELMKQHNVNAVRTSHYPP
HPRFIERCDELGMYVICEGDFEAHGFHLDRTESDDRGTQRRPANDPRFEKTLVERTRRFL
HRDKNHASIIMWSIGNESSTGTVTDAMCAAVREMDDGRLLIYEQDYLGRTVDVHSLMYPD
HRRSEAIGARNIDDDLADLLMRLCLDAGVDADMDTVRSARAWSLPFLWIEYAHAMGNGAG
ALKEYWDLVWRYEALHGGFIWEWIDHALLTTTADGTEVYGYGGDFGERIHDGNFVADGLV
LPDRTPSPALLDMKQVYAPIAFGFEGADGSVQLRIRNQYAFLSTDHLRVELSIDEQRTWS
ELEMEPVPAGGDALVPVPNGEVLTVRAVLRDADAVLPRALPAGHVVSIADRVALRAPSAP
AAPSSTGTAPSAPAAGACSASDASPALPEEAADGTWRLGPARFDRHGSLERLGDLPVTWA
GVDLTRAPVDNERAFTWTGLETRWRAVCLDVAQLRLASAEADGASLRFAKRLGLPGTGIG
ADIRETWTADSGGVHVAVDVEFDGWPDDLPVPRIGYTLAIDAAPAAGDDAVTYRGYGPFE
RYPDTGSGTTFATWRRSIAQMSTPYVFPQENGNRHGVRSAQIRTAAGVLGLRTDSGLGLA
VRPWSSAELDRAQHDGELRPDGRTWVTLSAALHGVGSAACGPGPLDQHLLMARPASFGFA
LSPEH
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacactgccgattcctgacatccacactggtgagggccgcctcgcgccccgcgcg
tggctgcggtcggacgcccccgagctgtccctcgacggcgactgggccttccgcttcgcc
ccggacggggagcggttcggggagaagaccagcatccgggtgcccggcatgtggcagctg
cagggccacggcgccccgcagtacacgaacttcatctacccgttcccgctcgatgtcccg
catgtcccgtcggagaacccgacgggggactatctgcgcacgttcgagctgtccgccgag
tgggggagcgccctggccgacggcgcccgcgtgttcctccgtttcgacggcgtggactcg
cacgggcaggtcgaggtgaacgggacgcggctcggggcgacggcggggtcgcgcctcacc
caggagttcgacgtcaccgaggctctcacctcgggtgagaacagtctgcgggtgctggtg
cggcagtggtccgccaattcgtacgtggaggaccaggacatgttctggctctccggcatc
ttccggtcggtgacgctgctgctgcggcctgccggcggcctgcacaacctcacggtcagc
accgacttcgacgccgccgccgggaccggttcgctgagcatccggcccgatctcctcacg
gcctccgtcggcaccgtgatctccggcctggaggagcatgaggcggcgcagcaggtgccg
ccggagcggatcgagctggtgatcgaggagctcggcatccgacgcgtgctgaccgccgga
gagaccacgacggtggatatgggcaacgtggagccgtggagcgcggagactccgcgcctg
tacgatgcgctggtccgcaccccgagtgagtgcgtgtcggtccggctcggcttccgccga
gtggagcgcgtaggggagaggatcctcgtcaacggacagcgcgtcgtgttccgcggggtg
aaccgccatgaggtggatgccgtgaccgggcggacgcagaacccggcgaatgaggaccgc
gacctggagctgatgaagcagcacaatgtgaacgcggtccgcacctcccactacccgccg
catccgcgcttcatcgagcggtgcgacgagctggggatgtatgtgatctgcgaaggcgac
ttcgaagcgcacggcttccacctggaccgcaccgagtccgatgaccgcggcacgcagcgt
cgaccggcgaacgatccgcggttcgagaagacgctcgtggagcggacgcgccggttcctg
caccgcgacaagaaccatgcctcgatcatcatgtggtcgatcggcaatgagtcctccacc
ggcaccgtgacggatgcgatgtgcgcggcggtgcgggagatggacgacggtcgtctgctc
atctatgagcaggactatctggggcgcaccgtggatgtgcattcgctgatgtacccggat
catcgccgcagtgaggcgatcggcgcccgaaacatcgatgacgacctcgcggacctgctg
atgcgcctgtgcctggatgccggggtcgatgccgatatggacacggtgcggtcggcgcgg
gcgtggagcctgcccttcctgtggatcgaatacgcccacgcgatggggaacggcgcgggt
gcgctgaaggagtactgggatctggtgtggcgctatgaggcgctgcacggcgggttcatc
tgggagtggatcgaccacgccctgctcaccacgaccgcggacggcaccgaggtctacggc
tacggcggcgacttcggggagcgcatccacgacggcaacttcgtggccgacggcctcgtc
ctcccggaccgcacgccgtcgccggcgctgctggacatgaagcaggtgtacgcacccatc
gcgttcggtttcgaaggcgcggacgggtccgtgcagttgcgcatccgcaaccagtacgcg
ttcctcagcaccgatcatctgcgcgtcgagctctcgatcgatgagcagcgcacgtggtcg
gagctggagatggagccggtcccggcgggcggggacgccctcgtgccggtgccgaacggt
gaggtgctgacggtgcgggcggttctgcgtgacgctgatgcggtcctgccgcgggcgctg
ccggctgggcacgtcgtctcgatcgcggaccgtgtggctctgcgggccccgtcggcccct
gccgcgccttccagcaccggcaccgcacccagcgcacccgccgcgggcgcctgctccgcc
tcggacgcgtcccctgcgctcccggaggaggcggccgacggcacctggcgcctcggcccg
gcgcggttcgaccgccacgggtccctcgagcgtctgggggacctgcccgtcacgtgggcg
ggtgtggacctcacgcgcgcccctgtggacaacgaacgcgccttcacctggaccggtctg
gagacccgctggcgggctgtctgcctggacgtcgcacagctgcgactggcgtcggcggag
gcggacggtgcatcgctgcggttcgccaagcggctcggtctgccgggcaccggcatcggt
gcggacatccgcgaaacgtggacggccgacagcggcggcgtccacgtcgccgtcgatgtg
gagttcgacgggtggccggatgacctgccggttccgcgcatcggctacacgctcgcgatc
gacgctgcccccgctgccggcgacgacgccgtcacctaccgcggctacgggccgttcgag
cgctacccggataccggcagcggcaccacgttcgccacctggaggcggtcgatcgcgcag
atgagcacgccgtacgtgttcccgcaggagaacggcaaccgtcacggtgtgcggtccgcg
cagatccgcaccgctgcgggggtcctagggctgcgcaccgacagcggcctgggtctggcg
gtgcggccctggtcctcagcggagctggaccgtgcccagcacgacggggagctgcggccc
gacggccggacgtgggtgacgctgtcggcggctctgcacggcgtcggctccgcggcctgc
ggaccgggtccgttggatcagcaccttctgatggcgcgcccggcgtcgttcggcttcgca
ctgagccctgagcattga
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