Helcobacillus massiliensis: R3I40_01405
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Entry
R3I40_01405 CDS
T09498
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm02024
Quorum sensing
hmm03060
Protein export
hmm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
R3I40_01405 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
R3I40_01405 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R3I40_01405 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hmm02044
]
R3I40_01405 (ffh)
Enzymes [BR:
hmm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
R3I40_01405 (ffh)
Secretion system [BR:
hmm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
R3I40_01405 (ffh)
Eukaryotic Sec-SRP protein
R3I40_01405 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
nSTAND3
cobW
CbiA
AAA_22
Zeta_toxin
MMR_HSR1
APS_kinase
Thymidylate_kin
AAA_30
AAA_33
AAA_18
TsaE
MobB
ArsA_ATPase
AAA_17
AAA_16
ABC_tran
NB-ARC
AAA_5
NPHP3_N
6PF2K
VapE-like_dom
ATP_bind_1
NACHT
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WOO93277
LinkDB
All DBs
Position
289839..291422
Genome browser
AA seq
527 aa
AA seq
DB search
MFNNLSDRITQSLKGLRGHGRLTEADVDKTVREIRRALLDADVAVPVVRSFAAQIRERAL
GEEVSKALNPAQQVVKIVHEELIEVLGGATGELRLAKNPPTVIMLAGLQGAGKTTLAGKL
AKWFKEQGHTPMLIASDLQRPNAVNQLQIVGRRAGVAVYAPQPGNGVGDPVQVARNGVAI
ARDKHHDIVIVDTAGRLGVDEEMMQQARDIRDAVNPDDTLFVVDAMIGQDAARVAESFRD
GVGFTGVVLSKLDGDARGGAALSITGVTERPILFASTGEALGDFERFHPDRMANRILDMG
DMLSLIEQAERSFDQKQTEQMASKLTKGEDFDFNDYLGLMAQMKKMGSMKKMLGMLPNMR
QYKEQIDQFDDSQLNRIEAIIQSMTPFERANPKQINGSRRARIAAGSGVTVTEVNQLLER
FKQAQKMMGSMGQGMAGGGMPGGPGMGFGKKSKGRQQPQQKKRKSKSGNPAKRAAQEKAW
AQKQANQPAGSAFGLGGQGGGEMPDLSSLDPKQLNSLPPEMRKMFGK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaacaacctgtccgaccggatcactcaatccctcaagggtctgcgaggccacggc
cgcctcaccgaagcggacgtcgacaagacagtccgcgagatccgccgcgcactcctggac
gccgacgtcgccgtccccgtggtccgctccttcgccgcccagatccgtgagcgcgccctc
ggtgaagaggtctccaaggctctcaaccccgcccagcaggtcgtcaagatcgtccacgag
gagctcatcgaagtcctcggcggcgccaccggtgagctgcgcctggcgaagaacccgccc
accgtcatcatgctcgccggcctccagggcgccggtaagaccaccctcgccggcaagctc
gcgaagtggttcaaggagcagggccacacgccgatgctgatcgcatccgacctgcagcgc
cccaacgccgtcaaccagctgcagatcgtgggtcgccgtgccggcgtcgccgtgtacgcc
ccgcagcccggcaacggtgtgggcgacccggtgcaggtggcgcgcaacggtgtcgccatc
gcccgcgacaagcaccacgacatcgtcatcgtcgacaccgcgggtcgcctcggtgtggac
gaggagatgatgcagcaggcccgcgacatccgcgacgccgtcaaccccgacgacaccctg
ttcgtggtcgacgcgatgatcggtcaggacgccgcccgcgtcgccgaatcgttccgcgac
ggcgtcggcttcaccggcgtggtcctctccaagctcgacggcgacgctcggggcggtgcc
gccctctccatcaccggcgtcaccgagcgcccgatcctgttcgcctccaccggtgaggcc
ctcggcgacttcgaacggttccacccggaccgcatggccaaccgcatcctcgacatgggc
gacatgctctccctcatcgagcaggcggagaggtcgttcgatcagaagcagaccgagcag
atggcgtccaagctcaccaagggcgaggacttcgacttcaacgactatctgggcctgatg
gcgcagatgaagaagatggggtcgatgaagaagatgctcggcatgctgccgaacatgcgc
cagtacaaggagcagatcgaccagttcgacgactcccagctgaaccgcatcgaagcgatc
atccagtcgatgaccccgttcgaacgcgcgaatcccaagcagatcaacgggtcccgtcgg
gcccgcatcgccgccggctccggtgtgaccgtcaccgaagtgaaccagctgctggagcgc
ttcaagcaggcgcagaagatgatgggctccatgggccaggggatggccggcggcggcatg
ccgggcggccccgggatgggcttcggcaagaagtccaagggccgccagcagccgcagcag
aagaagcggaagtcgaagtccggcaacccggcgaagcgcgccgcccaggagaaggcgtgg
gcgcagaagcaggcgaaccagcccgccgggtccgccttcggcctcggcggtcagggcggc
ggcgagatgccggacctgtccagcctcgatccgaagcagctgaactccctgccccctgag
atgcggaagatgttcggcaagtga
DBGET
integrated database retrieval system
