Helcobacillus massiliensis: R3I40_01595
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Entry
R3I40_01595 CDS
T09498
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hmm
Helcobacillus massiliensis
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmm03016
]
R3I40_01595 (truB)
Enzymes [BR:
hmm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R3I40_01595 (truB)
Transfer RNA biogenesis [BR:
hmm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R3I40_01595 (truB)
Prokaryotic type
R3I40_01595 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WOO93314
LinkDB
All DBs
Position
326351..327283
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AA seq
310 aa
AA seq
DB search
MNAPGPVGIALVDKPAGLTSHDVVARLRYHLGTRKVGHAGTLDPMATGLLVIGVGQGTKL
LTYAVGLDKTYEATIRLGVATITDDAEGDETGPRRPADGISDDQIAAAVEDLTGDILQVP
SAVSAIKVNGQRSYARVRAGDDVQLEARPIRVARFEVTGTRRQADGFCDIDAVIDCSSGT
YIRALARDLGEALGVGGHLTALRRTHVGKWSVQDAGTVPKRDAPKAAEDPSASPVVLRGL
GEVAGGLLPVVPVGEADARSLRFGQMIHAPEASSPEDAGELSAAVGPGEDLVAIVEPHRG
RLRPATVFPA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccccggtcccgtcggcatcgcgctggtcgacaaacccgccggcctcaccagc
catgacgtggtcgcgcgcctgcgctaccacctcggcacccgcaaggtgggccacgccggc
acgctggacccgatggcgaccgggctgctggtgatcggcgtcggccagggcaccaaactg
ctcacctacgccgtcggcctcgacaagacgtatgaggcgaccatccgcctcggcgtcgcc
accatcaccgacgacgccgagggcgacgaaacgggtccgcgccgcccggccgacggcatc
agcgacgaccagatcgccgctgccgtcgaggacctgaccggagacatcctccaggtcccc
agcgccgtgtccgccatcaaggtgaacgggcagcggtcctacgcccgcgtccgcgccggc
gacgacgtccagctggaggcccgccccatccgcgtggcccgcttcgaggtgacggggacc
cgtcggcaggccgacgggttctgcgacatcgacgccgtcatcgactgctcctccggcacc
tacatccgtgcactggcccgcgacctcggcgaggccctcggggtgggcgggcacctgacg
gctctgcgccgcacccacgtcggcaagtggagcgtgcaggacgccggcacggtgccgaag
cgggacgcgcccaaggcggcggaggacccgtcggcctccccagtggtgctgcgcggcctc
ggtgaggtcgccggcggcctgctgccggtggtgccggtgggggaggcggatgcgcgctcc
ctccggttcgggcagatgatccacgcaccagaggcgagcagccctgaggatgcgggggag
ctcagcgctgcggtcggtcccggggaggacctcgtggcgatcgtggagccgcaccgcggg
cgcctcagaccggccaccgtgttccccgcctga
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