Helcobacillus massiliensis: R3I40_02285
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Entry
R3I40_02285 CDS
T09498
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00260
Glycine, serine and threonine metabolism
hmm00460
Cyanoamino acid metabolism
hmm00630
Glyoxylate and dicarboxylate metabolism
hmm00670
One carbon pool by folate
hmm00680
Methane metabolism
hmm01100
Metabolic pathways
hmm01110
Biosynthesis of secondary metabolites
hmm01120
Microbial metabolism in diverse environments
hmm01200
Carbon metabolism
hmm01230
Biosynthesis of amino acids
hmm01240
Biosynthesis of cofactors
hmm04981
Folate transport and metabolism
Module
hmm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R3I40_02285 (glyA)
09102 Energy metabolism
00680 Methane metabolism
R3I40_02285 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R3I40_02285 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
R3I40_02285 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
R3I40_02285 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
R3I40_02285 (glyA)
Enzymes [BR:
hmm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
R3I40_02285 (glyA)
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
PK
Motif
Other DBs
NCBI-ProteinID:
WOO93441
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Position
476848..478116
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AA seq
422 aa
AA seq
DB search
MNLMNSSISELDPDIAKVLDQELGRQRDMLEMIASENFVPRAVLQAQGSVLTNKYAEGYP
GKRYYGGCEYVDVAENLAIERVKQLFGAEHANVQPHSGASANAAVMHALAEAGDTMMGLS
LAHGGHLTHGMKINFSGKLYNVVAYETEPDTGRIDMDKVRKLALETRPQVIVAGWSAYPR
QLEFDAFRSIADEVGAKLWVDMAHFAGLVAAGLHPSPIDYADVVSSTVHKTLAGPRSGLI
MSKAELARKVDSAVFPGQQGGPLMHVIAAKAVAFKVAQSAEFKERQQRTLEGAQIIADRL
MEKDAADAGIKLLSGGTDVHLVLVDLVNSKIDGQQAEDILHEVGITVNRNSVPNDPRPPR
VTSGLRVGTPALATRGFGAEEFTEVADVIAEALKGDADLEKLRARTRALADSKPLYAGLE
QY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgatgaacagctcgatctctgagctcgatcccgacatcgcgaaggtcctcgat
caggagctcggtcgccagcgcgacatgctcgaaatgatcgccagtgagaacttcgttccg
cgcgcagtcctgcaggcgcagggctccgtcctcaccaacaagtacgccgagggctacccc
ggcaagcgctactacggcggctgcgagtacgtggacgtcgcagagaacctcgccattgag
cgcgtcaagcagctgttcggtgctgagcacgccaacgtgcagccgcactccggcgcctcc
gcgaacgctgccgtgatgcacgcactcgccgaagccggcgacaccatgatgggtctgtcg
ctcgcccatggcggtcacctgacccacggcatgaagatcaacttctccggcaagctctac
aacgtcgtcgcctacgagacggagccggacaccggccgcatcgacatggacaaggtccgc
aagctcgcgctggagacccgcccgcaggtcatcgtggccggctggtcggcctacccgcgc
cagctcgagttcgatgccttccgctccatcgccgacgaggtcggcgcgaagctctgggtc
gacatggctcacttcgccggtctcgtggccgcgggcctgcaccccagccccatcgactac
gccgacgtcgtgtcctccacggtccacaagaccctggcgggcccccgctccggactgatc
atgtcgaaggcggaactcgcccgcaaggtcgactcagccgtgttcccgggccagcagggc
ggcccgctcatgcacgtcatcgccgccaaggccgtggcgttcaaggtcgcccagtccgcg
gagttcaaggagcgccagcagcgcaccctcgagggcgcccagatcatcgctgatcgcctc
atggagaaggacgccgcggatgccggcatcaagctcctctccggcggcactgacgtccac
ctcgtgctggtcgacctcgtcaactcgaagatcgacggccagcaggcggaggacatcctc
cacgaggtcggcatcaccgtgaaccgcaactccgtgcccaacgatccgcgcccgccgcgg
gtcacctcgggtctgcgcgtgggcacccccgccctcgccacccgcggcttcggcgccgag
gagttcaccgaggtcgccgatgtcatcgccgaggccctcaagggcgacgcggacctggag
aagctgcgtgcgcgcacccgcgccctcgccgactccaagccgctgtacgccggcctcgag
cagtactga
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