Helcobacillus massiliensis: R3I40_02315
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Entry
R3I40_02315 CDS
T09498
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00020
Citrate cycle (TCA cycle)
hmm00190
Oxidative phosphorylation
hmm00650
Butanoate metabolism
hmm00720
Other carbon fixation pathways
hmm01100
Metabolic pathways
hmm01110
Biosynthesis of secondary metabolites
hmm01120
Microbial metabolism in diverse environments
hmm01200
Carbon metabolism
Module
hmm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hmm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hmm_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
R3I40_02315 (sdhA)
00650 Butanoate metabolism
R3I40_02315 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
R3I40_02315 (sdhA)
00720 Other carbon fixation pathways
R3I40_02315 (sdhA)
Enzymes [BR:
hmm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
R3I40_02315 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
KdpD
MCD_N
Motif
Other DBs
NCBI-ProteinID:
WOO93446
LinkDB
All DBs
Position
complement(482953..484725)
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AA seq
590 aa
AA seq
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MQTHKYDVVIVGAGGAGMRAALESSTRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTYDTVKGGDYLVDQDAAEVMAKEAIDAVLDLEKMGLPFNRTPEGRIDQRRFGGHT
REHGEAPVRRSCYAADRTGHMILQTLYQNCVKQEVSFYNEFYVLDVLLSGDPRTDEDVRA
AGVVAYELATGEIHVFQAKSVVFASGGFGKMFKTTSNAHTLTGDGPAMVLRRGLPLEDME
FFQFHPTGLAGLGILLSEAARGEGGILRNSENERFMERYAPTLKDLAPRDVVARAMANEV
REGRGCGPNRDYVLLDLTHLEPAHIDAKLPDITEFARTYLNVEPYTEPIPVFPTAHYAMG
GIPTNIRGEVLRNEKDVVPGLYAAGEVACVSVHGANRLGTNSLLDINVFGRRAGIYAAEH
AHEVDFAEVAENAEAPTVQLLEELKNRPANPDRIAAIRRDLQEVMDAHVQVYRTDETCRH
ALAEIKKLKERYAAVSVDDKGTRYNLDLLEGVELGFLLDLAEVVALGALERKESRGGHFR
EDYQKRDDVNFLHHTMAYRTADGTGEEGTDIRLGKKDVVITRYEPKERTF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccacaagtacgacgtggtgatagtcggcgccggcggcgccggcatgcgcgct
gcgctggagtcctccacgcgcgcccgcaccgctgtgctgaccaagctgtaccccacccgc
tcccacacgggcgcggcccagggcggcatgtgcgccgccctggcgaacgtcgaagaggac
aactgggagtggcacacctacgacacggtcaagggcggcgactacctggtggaccaggac
gccgctgaggtgatggcgaaggaggcgatcgacgccgtcctcgacctcgagaagatgggc
ctcccgttcaaccgcaccccggagggccgcatcgaccagcgccgcttcggcggccacacc
cgcgagcacggtgaggcgccggtgcgccgctcctgctacgcagcggaccgcacgggccac
atgatcctgcagaccctctaccagaactgcgtcaagcaggaggtctcgttctacaacgag
ttctacgttctggacgtgctgctgtccggcgacccccgcaccgacgaggacgtccgcgcc
gccggcgtggtggcgtacgagctcgccaccggcgagatccacgtgttccaggcgaagtcc
gtcgtcttcgcctccggcggcttcggcaagatgttcaagaccacctccaacgcccacacc
ctcaccggtgacggccccgcgatggtgctgcggcgcggcctgccgctggaggacatggag
ttcttccagttccacccgaccggcctcgccggcctcggcatcctgctgtccgaagccgcc
cgcggcgagggcggcatcctgcgcaacagcgagaacgagcgcttcatggagcgctacgcc
cccacgctgaaggacctcgccccgcgtgacgtggtggcccgcgccatggcgaacgaggtg
cgcgagggccgcggctgcggcccgaaccgcgactacgtgctgctggacctcacccacctg
gagcccgcgcacatcgacgcgaagctgccggacatcaccgagttcgcccgcacctacctg
aacgtggagccgtacacggagccgatccccgtgttccccaccgcccactacgcgatgggc
ggcatccccaccaacatccgcggtgaggtgctgcgcaacgagaaggacgtggtgccgggc
ctgtacgccgccggcgaggtggcgtgcgtgtccgtgcacggggcgaaccgactcggcacg
aactcgctgctggacatcaacgtgttcggccgccgcgccggcatctacgccgccgagcac
gcccacgaggtggacttcgcggaggtcgccgagaacgctgaggcgccgaccgtccagctg
ctcgaggagctgaagaaccgcccggcgaacccggaccgcatcgcggcgatccgccgcgac
ctccaggaggtcatggacgcccacgtgcaggtgtaccgcaccgacgagacctgccgtcac
gcgctcgccgagatcaagaagctcaaggagcgctacgccgccgtgtccgtggacgacaag
ggcacccgctacaacctcgacctgctcgagggtgtggagctcggcttcctgctcgacctc
gccgaggtcgtcgccctgggcgccctggagcgcaaggagtcccgcggtggtcacttccgt
gaggactaccagaagcgcgatgacgtcaacttcctgcaccacaccatggcctaccgcacc
gcggacggcaccggtgaggagggcaccgacatccgcctgggcaagaaggacgtcgtcatc
acccgttacgagccgaaggagcgcacgttctga
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