Helcobacillus massiliensis: R3I40_03255
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Entry
R3I40_03255 CDS
T09498
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R3I40_03255 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmm03021
]
R3I40_03255 (rho)
03019 Messenger RNA biogenesis [BR:
hmm03019
]
R3I40_03255 (rho)
Transcription machinery [BR:
hmm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
R3I40_03255 (rho)
Messenger RNA biogenesis [BR:
hmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R3I40_03255 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
Spore_III_AA
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOO93619
LinkDB
All DBs
Position
695961..697988
Genome browser
AA seq
675 aa
AA seq
DB search
MTENNAQAAASDLQAKKLPELQAIATSMGIKSVRKYRKGELIAAIQSGGAASSAPASRPQ
ASDSGAPDSSERAEQDQEPFTAPQKPAENAEDSRSAKRGSDKRSSDEGTGTDRAGDDRPR
RVEDIQLPESPRTGRDSASADGRDSHEDRRDDDQQGSRGRRGRDRDRSDRDGDDRDDRRS
RRDRGGRSDRDGNRRDQGDGSRDDRDSRGQGRDDDRRHQDDEDGKGRGRNRQRSRSRDRR
RRGRDGDQQQGGGNGGQDEQVNEDDVLVAVAGILDIRDNYAFVRTTGYLPGESDVYVSMN
QVRKYGLRKGDAIAGQVKAPQDGDDNNQKNQGGGRNQGRGGRGGRGGRNMKNAHSKFAAL
VTVDAVNGMPPEHARNRKDFGKLTPLYPDSRLHLATTAGNFTTRIIDLVSPIGKGQRGLI
VAPPKTGKTIILQKIADAITTNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPA
DDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSSALYP
PKKFFGAARNVENGGSLTILATALVDTGSKMDEVIFEEFKGTGNWELKLERKLAERRIFP
AVDVNASGTRREEALMQNEELAVMWKLRRVLAQLEQQQALELLLERMKKTQSNTEFLMTV
AKSTPSVPRGSANGE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagaacaacgcccaggccgccgcaagcgacctgcaggccaagaagctccccgag
ctgcaggccatcgccacctccatgggcatcaagagcgtccgcaagtaccgcaagggcgag
ctcatcgcagcgattcagtccggcggcgccgcatcgagcgcccccgcatcgcgcccccag
gcctcggactccggcgcccccgactccagcgaacgcgctgagcaggaccaggagccgttc
accgctccgcagaagccggccgagaacgccgaggacagccgttccgcgaagcgcggctcc
gacaagcgctcctccgatgagggcaccggcaccgaccgcgcgggcgacgaccgcccccgc
cgcgtggaggacatccagctgcccgaatcgccgcgcaccggccgtgacagcgcgtcagcg
gacggccgagactcccacgaggaccgccgtgatgacgaccagcagggctcccgcggccgt
cgcgggcgcgaccgtgaccgcagcgaccgcgacggtgatgatcgcgacgatcgccgcagc
cgccgtgatcgcggcggccgctccgaccgcgacggcaatcgccgcgaccagggcgacggc
tcccgggacgaccgggacagccgcgggcagggccgtgatgacgatcgccgccaccaggac
gacgaggacggcaagggccgcggccgcaaccgccagcgctcccgctcccgggaccgtcgg
cgccgcgggcgcgacggcgaccagcagcagggcggcggcaacggcggccaggacgagcag
gtgaacgaggacgacgtcctcgtggccgtcgccggcatcctcgacatccgcgacaactac
gccttcgtccgcaccaccggctacctgccgggggagagcgacgtctacgtgtccatgaac
caggtccgcaagtacggcctgcgcaagggcgacgccatcgccggccaggtcaaggcccct
caggacggcgacgacaacaaccagaagaaccagggcggcggtcgcaaccagggccgcggc
ggtcgtggcggccgcggtgggcgcaacatgaagaacgcccactcgaagttcgccgcgctc
gtcacggtggacgccgtcaacggcatgccgcccgagcacgcccgcaaccgcaaggacttc
ggcaagctcaccccgctctacccggacagccgtctgcacctggcgaccaccgccggcaac
ttcaccacgcgcatcatcgacctggtctcaccgatcggcaagggccagcgcggcctgatc
gtggcgccgccgaagaccggcaagaccatcatcctgcagaagatcgcggacgccatcacc
acgaacaaccccgaggtccacctcatggtggtgctcgtggacgagcgccccgaagaggtc
accgacatgcagcgcaccgtcaagggtgaggtcatcgcctccaccttcgaccgtcctgcc
gatgaccacaccaccgtcgcggagctcgccattgagcgagcgaagcgcctggtggagctc
ggccgcgacgtggtggtcctgctggactccatcacccgtctgggccgtgcctacaacctg
gccgccccggcctcgggccgcatcctctccggtggtgtggactcctcggcgctgtacccg
ccgaagaagttcttcggtgccgcccgcaacgtggagaacggcggctcgctgacgatcctc
gcgaccgctctggtggacaccggctcgaagatggatgaagtgatcttcgaggagttcaag
ggcaccggcaactgggagctgaagctggagcgcaagctcgccgagcgccgcatcttcccg
gctgtggacgtcaacgcctcgggtacccgccgcgaggaggcgctcatgcagaacgaggag
ctcgcggtgatgtggaagctgcgccgcgtgctggcgcagctcgagcagcagcaggcgctc
gagcttctgctggagcggatgaagaagacccagtcgaacaccgagttcctgatgacggtc
gcgaagtccacgccgagcgtgccccgcggctccgccaacggggagtga
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