Helcobacillus massiliensis: R3I40_03425
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Entry
R3I40_03425 CDS
T09498
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00970
Aminoacyl-tRNA biosynthesis
hmm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
R3I40_03425 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hmm03029
]
R3I40_03425 (gatB)
Enzymes [BR:
hmm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
R3I40_03425 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
R3I40_03425 (gatB)
Mitochondrial biogenesis [BR:
hmm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
R3I40_03425 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
DNA_pol_B_thumb
Motif
Other DBs
NCBI-ProteinID:
WOO93653
LinkDB
All DBs
Position
729373..730926
Genome browser
AA seq
517 aa
AA seq
DB search
MSAQPVSANKVREYLDVQPLDFDDAVKTYDPVLGIEVHVELGTATKMFDGAPNVFAAEPN
TAITEVSLGLPGTLPVVNEKAVEYAIRIGLALNCEIAESCRFARKQYFYPDLTKNFQTSQ
YDEPIAFDGWVDVELEDGEIVRVEIERAHMEEDAGKNTHIGGSTGRIQGATHSQVDYNRA
GVPLVEIVTRPIPNVGERAPEVAAAYVRTLRDIFRALDVSEARMERGNVRADINVSLRAD
ADAPLGTRTETKNVNSFRAIERAVRFEICRQAGVLDAGMDVVQETRHFHDETGETSPGRV
KTDAEDYRYFPEPDLVPVAPSRDWVEQLRSTLPELPAARRRRLIGEWGFSDFEMRDVINA
GALDLIQETVDAGAKPQAARKWWMGELARYAKDKGVELDELGVSSAQVAELIGLIDEKKI
NDKIGRQVLGVIVEADGDGSPAQIVEDKGLAVVSDDSVLTDAVDAAIADNPDVVEKIKGG
KVQAIGALMGPVMKATRGQADAGRVRQIIMEKLGVAG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcagcccgtcagcgcgaacaaggtccgcgagtacctcgatgtgcagccgctg
gacttcgacgacgccgtgaagacctacgacccagtgctcggcatcgaggtccacgtggag
ctcggcaccgccaccaagatgttcgacggcgcaccgaacgtgttcgccgccgaaccgaac
accgccatcaccgaggtgtccctcggcctgcccggcaccctgccggtggtcaatgagaag
gctgtggagtacgcgatccggatcggcctcgccctcaactgcgagatcgccgagtcctgc
cgcttcgctcgcaagcagtacttctacccggacctgacgaagaacttccagacctcgcag
tacgacgagcccatcgccttcgacggctgggtcgacgtcgaactggaggacggcgagatc
gtccgcgtggagatcgaacgcgcccacatggaggaggacgccggcaagaacacccacatc
ggtgggtccaccggccgcatccagggcgccacccactcccaggtggactacaaccgcgcc
ggagtgcccctggtggagatcgtcacccgcccgatcccgaacgtcggcgagcgcgccccc
gaggtcgccgctgcgtacgtgcgcaccctgcgggacatcttccgcgctctggacgtctcc
gaggcgcggatggagcgcggcaacgtccgcgcggacatcaacgtgtcgctgcgcgccgat
gcggacgccccgctcggcacccgcaccgagacgaagaacgtcaactccttccgcgccatc
gaacgcgccgtccgcttcgagatctgccgccaggccggtgtcctcgacgccggaatggac
gtggtgcaggagacacgccacttccacgacgagaccggcgagaccagccccggacgtgtg
aagaccgacgccgaggactaccggtacttcccggagccggacctcgtgcccgtggcgccg
agccgcgactgggtggagcagctgcgctccacgctgccggagctgccggcggcgcgccgt
cgccgactcatcggcgagtggggcttcagcgacttcgagatgcgcgacgtcatcaacgcc
ggcgccctggacctcatccaggagacggtggacgccggtgcgaagccgcaggcggcccgc
aagtggtggatgggcgagctggcccgctacgccaaggacaagggcgtggagctcgacgag
ctcggcgtgtccagcgcccaggtggcggagctgatcggtctgatcgacgagaagaagatc
aacgacaagatcggccgtcaggtcctcggcgtcatcgtcgaggccgacggcgacggctcg
cccgcgcagatcgtggaggacaagggcctcgcggtcgtctccgacgactccgtgctcacc
gacgcggtcgacgccgccatcgccgataatcccgatgtggtcgagaagatcaagggcggc
aaggtgcaggccatcggcgccctcatgggccccgtcatgaaggcgacccggggtcaggcc
gatgccggccgcgtccgccagatcatcatggagaagctcggcgtcgccggctga
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