Helcobacillus massiliensis: R3I40_03565
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Entry
R3I40_03565 CDS
T09498
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00470
D-Amino acid metabolism
hmm00550
Peptidoglycan biosynthesis
hmm01100
Metabolic pathways
hmm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R3I40_03565
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R3I40_03565
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
R3I40_03565
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmm01011
]
R3I40_03565
Enzymes [BR:
hmm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
R3I40_03565
Peptidoglycan biosynthesis and degradation proteins [BR:
hmm01011
]
Precursor biosynthesis
Amino acid ligase
R3I40_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
ATP-grasp_3
CdhD
CPSase_L_D2
RimK
Motif
Other DBs
NCBI-ProteinID:
WOO93678
LinkDB
All DBs
Position
761484..762599
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AA seq
371 aa
AA seq
DB search
MSISVALLFGGRSGEHGISCVTAGGILRAIDRDRFTPIPIGITPSGRLVSVTDDPDHWVI
RDGRAPEVPEDGEEVLLPTVAKTAGKPSQLRVIRGGRVEHLADVDVFLPLLHGPYGEDGT
IQGLFDLLDLPYVGSGVLASAVCMDKDFTKRVLADAGIAVADGCVVRQEDWCTDEGRAEI
RARVAELQAPLFVKPSRAGSSLGVSRIEDLDGLEEALRSAFEVDPKVLVEAGVNGREVEC
GVLRTSRRHPVRSTQPGEVAIGDDLEFYDFESKYFGKGTVRIDVPASISEERAAQVRDIA
ERAFVALDLETLARVDVFVTDSGVIVNEINTMPGFTPFSMFPVLWENMGITYRELITELI
DSALAKPLGVH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccgtggccctcctcttcggcggccgctccggtgagcacggcatcagctgc
gtcaccgcgggcggcatcctccgcgccatcgaccgcgaccgcttcaccccgatccccatc
ggcatcacccccagcggccgcctcgtgtccgtcacggacgaccccgaccactgggtgatc
cgcgacggccgcgcccccgaagtgccggaggacggcgaggaggtcctcctgccgaccgtc
gcgaagaccgccgggaaaccgtcgcagctgcgcgtcatccggggcggccgtgtggagcac
cttgcggacgtggacgtgttcctgccgctgctgcacggcccctacggtgaggacggaacc
atccaggggctgttcgacctgctcgacctcccctacgtgggcagcggagtgctcgccagc
gcggtgtgcatggacaaggacttcaccaagcgggtcctcgccgatgccggcatcgccgtg
gccgacggctgcgtggtccgccaggaggactggtgcaccgatgagggccgcgccgagatc
cgcgcacgggtcgccgagctgcaggcaccgctgttcgtgaagccgtcccgggccggctcc
agcctcggcgtctcccgcatcgaggacctcgacggcctcgaggaagcgctgcgctccgcc
ttcgaggtggacccgaaggtgctggtggaggccggtgtcaacggccgcgaagtggagtgc
ggtgtgctgcgcacctcccgccgccacccggtgcgctccacgcagcccggtgaggtcgcc
atcggcgacgacctcgagttctacgacttcgaatcgaagtacttcggcaagggcactgtc
cggatcgacgtccccgcgtcgatcagcgaggagcgcgccgcgcaggtccgtgacatcgcc
gagcgcgcgttcgtggccctggacctggagaccctcgcccgggtcgacgtcttcgtcacc
gattccggcgtgatcgtcaacgagatcaacacgatgcccgggttcacgccgttctccatg
ttccccgtgctgtgggagaacatgggcatcacctaccgtgagctgatcaccgaactgatc
gactcggcgctcgccaagccgctcggcgtccactga
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