Helcobacillus massiliensis: R3I40_03620
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Entry
R3I40_03620 CDS
T09498
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R3I40_03620 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmm03400
]
R3I40_03620 (mutM)
Enzymes [BR:
hmm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
R3I40_03620 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
R3I40_03620 (mutM)
DNA repair and recombination proteins [BR:
hmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R3I40_03620 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WOO93689
LinkDB
All DBs
Position
771602..772555
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AA seq
317 aa
AA seq
DB search
MPEMPEVEVVRRGLAPYVTGRTIDRVEVHDVRSIRRHTPGADHLGDALVGRRIRSAVRRG
KFLWLLDDHLDDALMVHLGMSGQLRVSAPPATDPASVGGPGAGPTGAAPSEGPASDPVKH
LRVRLELDDGTRIDFIDQRIFGGLWLSPLEETADAAPAGEGDALPLIPSSAAHIARDLTD
PQLDVERTVAAIRRSRASIKSLLLNQQVVSGIGNIYADEALWAARIHYERPGESVSAAKV
RQLLAEARAVMERALEVGGTSFDALYVNVDGRSGYFARDLNVYGRSGLPCRRCGTPIVRE
KFTNRSSHFCPSCQRKR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgcccgaggtcgaggtcgtgcgccgcggcctcgccccctacgtcaccgga
cgcaccatcgaccgcgtcgaggtccatgacgtccggtcgatccgtcggcacactcccggt
gctgaccacctgggcgacgccctcgtggggcgccggatccgctccgccgtgcgccgcggg
aagttcctgtggctgctggacgaccacctcgacgacgcgctcatggtgcatctgggaatg
agcggccagctgcgcgtcagcgcaccgcccgcgaccgacccggcctccgtgggcggcccg
ggggcggggccgacgggcgccgcgcccagcgagggacccgcctccgacccggtcaaacac
ctgcgggtgcgtctggagctcgatgacggcacccgcatcgacttcatcgaccagcggatc
ttcggcggcctctggctctcgcccctggaggagacagcagatgctgctcccgccggtgaa
ggcgacgctcttcccctcattccctcctcggccgcgcacatcgcccgtgacctcaccgac
ccgcaacttgatgtggagcgcaccgtggctgcgatccgccgcagccgagcctccatcaag
tccctgctgctgaaccagcaggtggtctccggcatcggcaacatctacgccgacgaagcc
ctctgggcggcccgcatccactacgaacgccccggtgagagcgtcagcgcagcgaaggtg
cggcagctgctggcggaggcgagggcggtgatggagcgcgccctcgaggtgggcggcacg
agcttcgacgcgctgtacgtcaacgtcgacggccgctccggttatttcgcgcgggacctc
aatgtctatgggcgttctgggctaccgtgcaggcgttgcggtacccccattgtaagggaa
aaattcacgaaccgctctagccacttttgcccgtcttgccagcggaaacgctga
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