Helcobacillus massiliensis: R3I40_04160
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Entry
R3I40_04160 CDS
T09498
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
R3I40_04160 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmm01007
]
R3I40_04160 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmm03016
]
R3I40_04160 (aspS)
03029 Mitochondrial biogenesis [BR:
hmm03029
]
R3I40_04160 (aspS)
Enzymes [BR:
hmm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
R3I40_04160 (aspS)
Amino acid related enzymes [BR:
hmm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
R3I40_04160 (aspS)
Transfer RNA biogenesis [BR:
hmm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
R3I40_04160 (aspS)
Prokaryotic type
Other AARSs
R3I40_04160 (aspS)
Mitochondrial biogenesis [BR:
hmm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
R3I40_04160 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WOO93784
LinkDB
All DBs
Position
895214..897010
Genome browser
AA seq
598 aa
AA seq
DB search
MLRSHNAGELREEHIGQTVTLAGWIGRRRDHGGVAFLDLRDASGVAQVVVREEDAHHLRS
EYVLKVTGTVEKRPEGNENDALPTGTIEVIADTVEVLNPSAALPFQLDEHSDVGEEARLR
YRYLDMRRSGPAKILRLRSAVNQAARTTLIDQGFVEVETPTLTRSTPEGARDFLVPARLA
PGSWYALPQSPQLFKQLLMVGGMERYFQLARCYRDEDFRADRQPEFTQLDVEMSFVDQDD
IIALTEQLLQNIWATIGVEVATPIPRITYAESMRRYGSDKPDLRFDLEITEMTEYFQNTP
FRVFQAPYVGAIVMAGGASQPRRQLDAWQEWAKQRGAKGLAYVLIQEDGTLGGPVAKNLS
DEEKAGLAQKTGAQPGDCVFFAAGDAKSSRGLLGAARNEIAEKLGLIDDDKFAFVWVVDA
PMFEPAGDAVAAGDVAVGSGAWTAVHHAFTSPKPEFLDTFDTDPASALSYGYDIVCNGNE
IGGGSIRIHQEDVQKRVFQVMGISEEEAQEKFGFLLEAFKYGAPPHGGIAFGWDRIVALL
AKVDSIREVIAFPKTGGGFDPLTEAPAPITAQQRKEAGVDAKPKKKDEAEAAAENAEA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctctcacaacgccggtgagctccgcgaggagcacatcggacagaccgtcact
ctggccggctggatcggtcgtcgccgcgaccacggcggcgtcgctttcctcgacctgcgg
gacgcctcgggcgtcgctcaggttgtggtccgcgaagaggacgcccaccacctccgcagc
gaatacgtgctgaaggtgaccggcacggtcgagaagcgccccgaaggcaacgagaacgat
gccctgcccaccggcaccatcgaagtcatcgcggacacggtcgaggtgctgaacccgtcg
gccgccctcccgttccagctggacgagcactccgacgtcggtgaagaggcccgcctgcgc
taccgttacctcgacatgcgccgcagcggccccgcgaagatcctccgcctgcgctccgcc
gtcaatcaggcagcgcgcaccaccctgatcgaccagggcttcgtcgaggtcgagaccccg
accctgactcgctccacccccgagggcgcccgcgacttcctcgtcccggcgcgcctcgca
cccggctcctggtacgccctgccgcagtcgccgcagctgttcaagcagctgctgatggtc
ggcggcatggagcgctacttccagctcgcccgctgctaccgcgacgaggacttccgcgcg
gaccgccagcccgagttcacccagctcgatgtcgagatgagcttcgtggaccaggacgac
atcatcgccctcaccgagcagctgctgcagaacatctgggccaccatcggcgtcgaggtc
gccaccccgatcccgcgcatcacctacgcggagtcgatgcgccgctacggctccgacaag
ccggatctgcgcttcgaccttgagatcaccgagatgaccgagtacttccagaacacgccg
ttccgcgtgttccaggccccgtacgtcggtgcgatcgtgatggccggcggtgcctcccag
ccccgccgtcagctcgacgcctggcaggaatgggcgaagcagcgcggtgcgaagggcctc
gcctacgtcctcatccaggaggacggcaccctcggcggacccgtcgccaagaacctctcc
gatgaggagaaggccggcctcgcccagaagaccggcgcccagccgggcgactgcgtgttc
ttcgccgccggtgacgccaagagctcccgtggcctgctcggcgccgcccgcaatgagatc
gccgagaagctcggcctcatcgacgacgacaaattcgcgttcgtgtgggtggtggacgcg
cccatgttcgagccggccggtgacgccgtcgccgccggtgatgtggccgtcggctccggc
gcctggaccgccgtgcaccacgcgttcacctccccgaagccggaattcctcgacaccttc
gacaccgatccggcgtccgccctcagctacggctacgacatcgtctgcaacggcaacgag
atcggcggcggctccatccgcatccaccaggaggatgtgcagaagcgcgtcttccaggtg
atgggcatctccgaggaggaggcgcaggagaagttcggcttcctgctggaggcgttcaag
tacggcgccccgccgcacggcggcatcgccttcggctgggaccgcatcgtggcactcctc
gccaaggtcgactccatccgcgaggtcatcgcgttcccgaagaccggcggcggcttcgac
ccgctgaccgaggcacccgctccgatcaccgctcagcagcggaaggaagccggcgtggat
gccaagccgaagaagaaggacgaggcggaggctgctgcggagaacgccgaagcctga
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