Helcobacillus massiliensis: R3I40_04315
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Entry
R3I40_04315 CDS
T09498
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hmm
Helcobacillus massiliensis
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmm03032
]
R3I40_04315
03400 DNA repair and recombination proteins [BR:
hmm03400
]
R3I40_04315
Enzymes [BR:
hmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
R3I40_04315
DNA replication proteins [BR:
hmm03032
]
Prokaryotic type
DNA Topoisomerases
R3I40_04315
DNA repair and recombination proteins [BR:
hmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R3I40_04315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
WOO93811
LinkDB
All DBs
Position
complement(929756..932233)
Genome browser
AA seq
825 aa
AA seq
DB search
MARTRSEKTPPPIKENIQDIDVTSEMETSFLEYAYSVIYSRALPDARDGLKPVQRRILYM
MDEMGLRPDRGHVKSQRVVGEVMGKLHPHGDSAIYDALVRMAQDFSMRLPLVDGHGNFGS
LDNGPAAARYTEARLAPAALLMTSSLHEDVVDTVPNYDNQLTQPEVLPAQFPNLLVNGAA
GIAVGMATNMAPHNLVEVIAAARHLLEHPDATLEDLMRFVPGPDLPTRAKIVGLDGIRDA
YRTGRGSFRMRATTTVENITSRRKAIVVTELPYQVGPERLAEKLRDAVQRKRVQGITDYQ
DYSDRRNGMRLVLALKSGYNPEAVLAQLYKHTPLEESFGINNVALVEGQPRTLGLQQLLE
VFIAHRLDVVRRRTEFRLGRHSDRLHLVEGLLIAILDIDEVIQIIRSSDTSEEARTRLMQ
IFDLSEIQAEYILELRLRRLTKFSRIELESERDELLREIERLKEILGSDALLRQLVSSEL
AEVAKEHGTARRTILLDSEAAQVDPKSLDLEVKDEPCQVVLSGTGLIARIPATDTDDPAA
TPAGATRSQHDVVVARVRTTTRALIGAVTSTGRLLHVNVVELHALAPSAGSTSMAGGTRL
TDLVSLEKGERVVGLVRVDEDDTQRGGGIALGTRGGVVKRVSPAFPKSDGFDIISLKDGD
EVVAAVDMEDDQDVHLAFITSDAQLLHFPASGVRPQGRAGGGVAGIRLADGAEVIGFSAF
TITKDAAVVTISGSSGALADVQTGSLKVSDAADFPARGRATAGMRCHRFLRGEDVLLKGW
VVNAPAMASSDAGAPIDLPSPIARRDGSGSPTAIPIAAVGPGTAL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcacacgctctgaaaagacgccgcctccgatcaaggagaacatccaggacatc
gatgtcaccagtgaaatggagacgtcgttcctcgagtacgcgtactcggtgatctactcg
cgcgccctgcccgatgcgcgcgacggtctgaagccggtgcagcgccgcatcctctacatg
atggatgagatggggctgcggccggaccgcgggcacgtgaagagccagcgcgtcgtcggc
gaggtgatgggcaagctccacccgcacggcgactccgccatctacgacgccctcgtccgc
atggcgcaggacttctccatgcgcctgccgctggtggacggccacggcaacttcggctcc
ctcgacaacggcccggccgccgcccgctacacggaggcgcgcctcgcccccgccgccctc
ctgatgacctcgtccctgcatgaggacgtggtggacaccgtccccaactacgacaaccag
ctcacccagccggaggtgctgcccgcgcagttcccgaacctgctggtcaacggcgccgcc
ggcatcgcagtcggcatggcgacgaacatggcgccgcacaacctcgtggaggtcatcgcc
gcggcccgccacctgctggagcacccggatgcgacccttgaggacctgatgcggttcgtg
cccggccccgacctgccgacgagggcgaagatcgtgggcctggacggcatccgggacgcg
taccgcaccgggcgaggctccttccgcatgcgcgccaccaccacggtggagaacatcacc
agtcgccgcaaggcgatcgtggtgaccgaactgccgtaccaggtgggcccggagcggctc
gcggagaagctgcgggatgcggtgcagcgcaagcgcgtgcagggcatcaccgactaccag
gactactcggaccgcaggaacggcatgcgcctggtgctggcgctgaagtccggttacaac
ccggaggcggtcctcgcccagctgtacaagcacacgccgctggaggagtccttcggcatc
aacaacgtggcccttgtggagggccagccgcgcaccctcggcctgcagcagctgctcgag
gtgttcatcgcgcaccgtctggacgtggtgcgccggcgcaccgaattccgcctcggtcgt
cacagcgaccgcctccacctggtggagggcctgctgatcgcgatcctcgacatcgacgag
gtcatccagatcatccgctcctccgacacctccgaggaggcccgcacccgcctgatgcag
atcttcgacctgtcggagatccaggcggagtacatcctggagctgcggctgcgccgcctg
acgaagttctcccgcatcgagctggagtccgaacgggacgagcttctgcgggagatcgaa
cgcctcaaggagatcctcggctccgatgctctgctgcgccagctggtgtccagcgagctc
gctgaggtggcgaaggagcacgggacggcgcgccgcaccatcctgctggattcggaggcc
gcgcaggtggatccgaagtccctcgacctcgaggtgaaggacgaaccctgccaggtggtc
ctgtccggaaccggcctgatcgcccgcatccccgcgaccgacaccgacgacccggccgcc
acacccgccggcgccacccgctcccagcatgacgtggtggtcgcgcgagtgcgcaccacc
acccgcgccctcatcggcgccgtcacctccacgggccgcctgctgcacgtcaacgtggtg
gagctgcacgcgctggccccgtcggccggctccacctcgatggccggcggcacccgcctg
accgacctggtctccctggagaagggcgaacgcgtggtgggcctggtgcgcgtggacgag
gacgacacgcagcgcggcggcggaatcgccctcggcacccgcggcggcgtggtcaagcgg
gtctcccccgcgttcccgaagtccgacgggttcgacatcatctccctcaaggacggcgac
gaggtcgtcgcagctgtggacatggaggacgatcaggacgtccacctcgcgttcatcacc
tccgacgcccagctgctgcacttccccgcctcgggggtgcggccgcagggccgcgccggc
ggcggggtcgccggcatccggctggccgacggggcggaggtcatcgggttcagtgcgttc
accatcacgaaggacgccgccgtggtgacgatctccggctcctccggtgcgctcgcagac
gtccagaccgggtcgctgaaggtgtccgacgccgctgacttccccgcgcgcggccgcgcc
accgcgggaatgcgctgccaccggttcctgcgcggtgaggacgtcctgctgaagggatgg
gtggtgaacgccccggcgatggcgtccagtgacgccggtgcgccgatcgacctgccgtcc
ccgatcgcgcggcgcgacggctccggctcccccaccgcgatcccgatcgctgcggtgggc
ccgggcactgcgctctga
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