Helcobacillus massiliensis: R3I40_05340
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Entry
R3I40_05340 CDS
T09498
Name
(GenBank) SufS family cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00450
Selenocompound metabolism
hmm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
R3I40_05340
Enzymes [BR:
hmm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
R3I40_05340
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
R3I40_05340
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SH3_1
SelA
Motif
Other DBs
NCBI-ProteinID:
WOO94006
LinkDB
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Position
complement(1151126..1152394)
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AA seq
422 aa
AA seq
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MRDWDIESIRADFPILTRTTADGQPIVYLDSGATSQRPRQVIDAEVDFLTGHNAAVKRGA
HQLAEDATDRYESARETIARFVGCRDERELIFTKNATEALNIVAYSLSNGDASTPDHLRV
KEGDEILVTEMEHHANLVPWQELVRRTGATLRWIPLADDFTLDLTDLDTLLTERTKVVAF
THQSNVTGTINPVARLVEAAKDVGALTVLDACQSVPHMPVDVQDLGVDFAAFSGHKMLGP
TGIGALWGRFELLAEMPPVMLGGSMIEVVTMEQTTFAEPPARFEAGTPMISQAIGLAAAV
DYLSDLGMDRIAEHERQLTQRAVRGLEAIDGVRVIGPSSDAPGRAGAVAFAVDGRHPHDI
GQVLDSQGVLVRVGHHCAWPLHRRYGLPGTSRASFSVHTTEAEVDALLDSVRTAIDFFAR
FQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgactgggacatcgaatcgatccgagcggatttcccgatcctgacgcgcaccaca
gcggacggtcagcccatcgtctacctcgactccggcgccacctcccagcggccccgccag
gtcatcgacgccgaagtcgacttcctcaccggccacaacgccgccgtcaagcgcggcgcc
caccagctcgcggaggacgccaccgaccggtacgagtcggcccgcgagacgatcgcgcgc
ttcgtcggctgccgggacgagcgggaactgatcttcaccaagaacgccaccgaggcgctc
aacatcgtggcctactccctgtccaacggggacgcctccacccccgaccacctgcgggtc
aaggagggcgacgagatccttgtgaccgaaatggagcaccacgcgaacctggtgccctgg
caggagctcgtccgccgcaccggcgcgaccctgcgctggatccccctcgcggacgacttc
accctcgacctcaccgacctcgacaccctcctcaccgagcggacgaaggtggtcgccttc
actcaccagtccaacgtcaccggcacgatcaacccggtggcccgtctggtcgaggccgcg
aaggacgtgggagcgctgactgttctcgacgcctgccagtcggtgccgcacatgccggtc
gatgtccaggacctcggggtcgacttcgccgccttcagcggccataagatgctcggaccc
accggcatcggtgctctctgggggcgcttcgagctgctcgctgagatgccgccggtgatg
ctcggcggctccatgatcgaggtcgtcaccatggagcagacgaccttcgccgagcccccg
gcgcggttcgaagccggcaccccgatgatctcacaggccatcggcctcgccgccgctgtc
gactacctcagcgacctcggcatggaccgcatcgccgaacacgaacggcagctcactcag
cgcgcggtgcgcggcctcgaggcgatcgacggtgtccgcgtcatcggcccttcttccgat
gcccccggccgcgccggcgccgtcgcgttcgccgtggacggccgccacccgcacgacatc
ggccaggtgctcgactcccagggcgtcctcgtgcgcgtgggccaccactgcgcctggccc
cttcaccgccgctacggcctgcccggcaccagccgcgccagcttcagcgtccacaccacc
gaggcggaggtcgacgccctgctcgactccgtccgcaccgccatcgacttcttcgcgagg
ttccagtga
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