Helcobacillus massiliensis: R3I40_05665
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Entry
R3I40_05665 CDS
T09498
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00910
Nitrogen metabolism
hmm01100
Metabolic pathways
hmm01120
Microbial metabolism in diverse environments
hmm01310
Nitrogen cycle
Module
hmm_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
R3I40_05665 (nirB)
Enzymes [BR:
hmm01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
R3I40_05665 (nirB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
NIR_SIR_ferr
Rubredoxin_C
NAD_binding_8
NAD_binding_7
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WOO94064
LinkDB
All DBs
Position
complement(1223233..1225926)
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AA seq
897 aa
AA seq
DB search
MTTDTLAHSTNEPAVEHVVVVGGGPAAHRFTETMRRRDTEDRFKVTVISEEALAPYDRVN
LAKRWDRSYDLTLGDPTLWEDEHVGLVLGDRVNSIDTELRQVRTRSGTIYGYDHLVMATG
SNAFTPPISGWDTKGVFVYRTVDDVDQMADCVQGMQSDENRTGSAVVLGGGLLGLEAAGG
LAAEGYDVHLVELADWLMPAQLDEGGGRLLNRLIEQRGITLHMGVSLDSIEKRISSRKPS
ASEADALASAASNVRAVRLSDGSEIPADLVCLAVGIRPRDELAKVGGFEIGPRGGIMVGQ
DCATSIDRVWAIGEVAAVEGRCYGLVAPANTMAEVVVDRLLGGKAVFGEPDSSTKLKLSG
IDVASFGDAKSTQKNTLDVVFADPTQGIYQKLILSSDVRVLLGGILVGNAENYSTLRAYI
GRELPGDPSAYLAAGGGELPDTGDIPDEVVVCSCNNVTSGTIKCAVNGEGDFETPARDIA
TLKACTNAGTQCGSCVPLMQKILAAQLAKAGIAVSTALCEHFDYSRSELYAKIRENDLST
FDEVIAEYGTGHGCDVCKPTVASILASQRDRYILDRGLGELQDTNDRFIGNMQKDGTYSV
VPRVPGGEITPERLRVIAEVAADFNLYTKITGAQRIGLFGARLEQLPHIWQRLVDAGMES
GQAYGKSLRTVKSCVGSTWCRFGQQDSVSMAILLEERYKGLRSPHKFKLGVSGCARECAE
ARGKDIGVIATDKGWNLYVGGNGGFSPRHAELLASDVDDDTLVSLVDRFLGYYIRSAEKL
QRTAAWIDSMDGGIDHVHAVVVEDSLGIADELEKEMQEFVDGHEDEWVATLKDPQKLARF
RSFINAPEAADPLFARVPERDQNRPATLEERESVLISGPEIAFRGPRGEAIGSGRTV
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgacactctcgcgcacagcacgaacgaaccggcggtcgagcacgtcgtcgtg
gtgggcggcggacccgccgcacaccgcttcaccgagacgatgcgccgccgcgacaccgag
gatcgcttcaaggtcaccgtcatctccgaagaggccctggcgccctacgaccgcgtcaac
ctcgccaagcgctgggaccgctcctacgacctcaccctcggcgaccccaccctgtgggag
gacgagcacgtcggcctcgtcctcggcgaccgcgtcaactccatcgacaccgagctgcgg
caggtccggacccgctccggcaccatctacggctacgaccacctcgtcatggccaccggc
tccaatgccttcaccccgccgatctccggctgggacaccaagggcgtgttcgtgtaccgc
accgtcgacgacgtcgaccagatggcggactgcgtgcagggcatgcagtccgacgagaac
cgcaccggctccgccgtcgtcctcggcggtggccttctcggtctcgaagcagccggtggt
ctcgccgccgaagggtacgacgtccacctcgtcgaactcgccgactggctgatgcccgcc
cagctcgacgaaggcggcggccgactgctcaaccgcctcatcgaacagcgcggcatcacc
ctccacatgggcgtctccctcgactccatcgagaagcggatctcctcgcggaagccgtcg
gcctccgaagccgacgcgctggcgagcgccgcctccaacgtgcgtgccgttcgactctcc
gacggctccgagatccctgcggatctggtctgcctcgccgtcggcatccgcccccgcgat
gagctcgcgaaggtcggcggcttcgagatcgggccgcgcggcggcatcatggtcgggcag
gactgcgccacctccatcgaccgggtgtgggcgatcggtgaagtggccgctgtggagggc
cgctgctacggcctggtcgcccccgccaacacgatggcggaagtggtcgtcgaccgcctc
ctcggcggaaaggccgtgttcggcgaacccgactcctccaccaagctgaagctctccggc
atcgacgtcgccagcttcggcgatgccaagagcacccagaagaacaccttggacgtcgtc
ttcgccgaccccacgcaggggatctaccagaagctcatcctgtcctccgatgtgcgggtc
ctgctcggtggcatcctcgtcggcaacgcagagaactactcgaccctgcgcgcctacatc
ggccgcgagctgccgggggacccgtcggcctacctcgccgccggcggcggtgagctgccc
gacaccggcgacatccccgatgaggtcgtggtctgctcgtgcaacaacgtcacctccggc
accatcaagtgcgccgtcaacggcgagggggacttcgagacccccgcccgcgacatcgcc
accctgaaggcctgcacgaacgccggcacccagtgcggctcctgcgtgccgctcatgcag
aagatcctcgccgcgcagctcgcgaaggccggcatcgccgtgtccaccgcgctgtgcgag
cacttcgactactcgcgctccgagctgtacgcgaagatccgggagaatgacctcagcacg
ttcgacgaggtcatcgcggaatacggcaccggtcacggctgtgacgtctgcaagccgacc
gtcgcctccatcctcgcctcccagcgggaccgctacatcctcgaccgagggctcggcgag
ctgcaggacaccaacgaccgattcatcggcaatatgcagaaggacggcacctactccgtg
gtgccgcgcgtgcccggcggtgagatcaccccggagcgtctgcgcgtcatcgcggaggtc
gccgccgacttcaacctgtacacgaagatcaccggcgcgcagcgcatcggcctgttcggc
gcccgcctcgaacagctgccccatatctggcagcggctcgtggacgccgggatggagtcc
ggccaggcgtacggcaagtccctgcgcacggtgaagagctgcgtgggctccacctggtgc
cgcttcggccagcaggactccgtgtccatggcgatcctcctggaggagcgctacaagggc
ctgcgctccccgcacaagttcaagctcggcgtgtccggctgcgcccgcgaatgtgcggag
gcccgtgggaaggacatcggcgtgatcgccaccgataagggctggaacctgtacgtcggc
ggcaacggcggcttctcgccccgccacgccgaactgctcgcctccgacgtcgacgacgac
accctcgtctccctcgtggaccgcttcctcggctactacatccgctccgcggagaagctg
cagcgcaccgctgcgtggatcgactcgatggacggcggcatcgaccacgtccacgccgtc
gtcgtcgaggactccctcggcatcgccgacgaactggagaaggagatgcaggagttcgtg
gacggccacgaggacgaatgggtcgccaccctgaaggacccccagaagctcgcccgtttc
cgctccttcatcaacgcccccgaggccgccgacccgctgttcgcccgcgtccccgaacgc
gaccagaaccgccccgccaccctggaggagcgggaatcggtcctcatctccggccccgag
atcgcgttccgcggaccgcgcggcgaagccatcggctccgggcgcacagtgtga
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