Helcobacillus massiliensis: R3I40_05880
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Entry
R3I40_05880 CDS
T09498
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
hmm
Helcobacillus massiliensis
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmm03009
]
R3I40_05880
Enzymes [BR:
hmm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
R3I40_05880
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
R3I40_05880
Ribosome biogenesis [BR:
hmm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
R3I40_05880
23S rRNA modification factors
R3I40_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
WOO94099
LinkDB
All DBs
Position
complement(1265493..1266326)
Genome browser
AA seq
277 aa
AA seq
DB search
MSTRIDTALHQRGLASSRTHARRIVEEGRALINGARARRASAPVGPDDRLDVTGAPVGGE
YASRAAHKLAGALTAFHLDDTADGSHALDLGASTGGFTDVLLRAGARTVTAVDVGTGQLI
ERLRANERVRSLEQTDARTLSVDTVGHRPDLIVSDVSFISLTQIIPTISRVAADGADIVL
MVKPQFEVGRGNLPKSGVVTDPALWRRAVTAVAEACAEHALTVVGVQVSTLPGQDGNREF
FLHGRNTPPNPACSHHVCGMIDEAVERASGRGEGRTR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccgcatcgacaccgcgctccatcagcgcggcctcgcatcctcgcgcacccac
gcccgccgcatcgtggaggaaggcagggcgctcatcaacggcgcccgggcccggcgcgca
tccgctcccgtcggccctgacgaccgcctcgacgtcaccggagcacccgtcggcggcgaa
tacgcctcccgggccgcccacaagctcgccggcgccctcaccgccttccacctcgacgac
acggccgacgggtcccacgctctggacctcggcgcctccaccggcggattcaccgacgtc
ctcctgcgcgccggcgcccgcaccgtcaccgccgtcgacgtcggcaccgggcagctcatc
gagcgcctccgcgccaacgagcgtgtgcgcagcctcgaacagaccgacgcccgcaccctc
agcgtcgacaccgtcggtcaccggcccgacctcatcgtctccgacgtctccttcatctcc
ctcacccagatcatccccacgatcagccgcgtcgccgccgacggcgccgacatcgtcctc
atggtcaaaccccaattcgaagtgggccggggcaacctcccgaaatccggggtcgtcacc
gaccccgcgctctggcgccgcgccgtcaccgctgtcgccgaggcctgcgccgagcacgca
ctgaccgtcgtcggcgtgcaggtgagcacgctgcccggccaggacggcaaccgtgagttc
ttcctccatgggcgcaacaccccacccaatcccgcctgctcccaccacgtctgtgggatg
atcgacgaagcagtcgaacgggccagcggacgcggagaaggaaggaccagatga
DBGET
integrated database retrieval system
