Helcobacillus massiliensis: R3I40_06390
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Entry
R3I40_06390 CDS
T09498
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm00260
Glycine, serine and threonine metabolism
hmm00630
Glyoxylate and dicarboxylate metabolism
hmm00670
One carbon pool by folate
hmm00785
Lipoic acid metabolism
hmm01100
Metabolic pathways
hmm01110
Biosynthesis of secondary metabolites
hmm01200
Carbon metabolism
Module
hmm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R3I40_06390 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R3I40_06390 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
R3I40_06390 (gcvP)
00670 One carbon pool by folate
R3I40_06390 (gcvP)
Enzymes [BR:
hmm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
R3I40_06390 (gcvP)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
WOO92040
LinkDB
All DBs
Position
complement(1379240..1382200)
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AA seq
986 aa
AA seq
DB search
MSDMNEAIYGQHSFVRRHVGTTANDQEHMLKALGVSSLSELMEKAVPSTIYLGEEPDSIL
PEAATESATLEELRGFAKKNNAKRSLIGLGYYGTHTPSVIQRNILENPGWYTAYTPYQPE
ISQGRLESLMNFQTMIADLTGMDLSNASMLDEASAAAESMMLARRQNRRQKSNVFLVDAD
VLPTTRYVLEGRADILGFELKYVDFANDGAPEGDFFGALIQYPGASGRVWDATEVIAELK
KSKAVVIVAADLLALTLLKSPGEMGADVVMGTSQRFGVPLGFGGPHAAFVAVNDDLKRQL
PGRLVGISKDADGNPAYRLSLQTREQHIRREKATSNITTAQVLLAVMASMYAVYHGPDGL
TALARQTADRTATLAAWLKDAGFTLKHEAFFDTLRIEAPGRAKDIYEAFKKAEMLIHVVD
DDTVQLSLDETVTAEDLKAIAGVFGEFGSAKGEIEDGAVKSGDAWGGLVRETSFLQHPVF
QSFHSETAMMRYLRRLSDRDYGLDRGMIPLGSCTMKLNSATEMAAITWPEFNSVHPFAPV
EDVEGYLEMITQLEEWLADLTGYDTVSLQPNAGSQGEVAGLLAIKAYHNSRGESQRDVCV
VPSSAHGTNAASAAIVGMRVVVVASDANGNIDVDDLKQKIKDHGDELAAIMITYPSTHGV
YESEVRTICQLVHDAGGQVYVDGANATALLQVARPGEFGGDVSHLNLHKTFCIPHGGGGP
GVGPVAAKAHLAPFLPGHPQIQKPEHPVVGEGEQVHGGAPVSQAPYGSASILPISWAYIR
MMGAEGIRHATSSAVLGANYLAKRLSEKFEILYTGENGLVAHECIVDLRPFTARTGITVD
DMAKRLIDYGFHAPTMSFPVAGTFMVEPTESEDLQELDRFADAMLAMYDEAEKVLSGEWP
KDDNPLVNAPHTAECASASEWEHPYSREVAVYPGVDNSEDVKGCHSNRAMRIQAKYWPVV
RRIEQAFGDRNLVPTWGDFSGTVGGE
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatatgaacgaggccatctacggccagcattcgtttgtccgccgccacgtgggc
accaccgcgaacgaccaggagcacatgctcaaggcgctcggcgtctcgtcgctctcggag
ctcatggagaaggccgtgcccagcacgatctacctcggtgaggagcccgactcgatcctg
ccggaggcagcgaccgagtccgcgaccctcgaggagctgcgcggcttcgcgaagaagaac
aacgcgaagcgctcgctgatcggcctgggctactacggcacacacacgccgtcggtcatc
cagcgcaacatcctggagaacccgggctggtacacggcctacacgccgtaccagccggag
atctcccagggtcgtctggagtcgctgatgaacttccagacgatgatcgccgacctcacc
ggcatggatctgtccaacgcatcgatgctcgacgaggcctccgcggccgctgagagcatg
atgctcgcccgtcgtcagaaccgtcgccagaagtccaacgtgttcctcgtggacgcggac
gtcctgccgaccacccgctacgtcctcgagggccgtgccgacatcctcggcttcgagctc
aagtacgtggacttcgcgaacgacggtgcacccgagggcgacttcttcggtgccctgatc
cagtacccgggcgcttccggccgggtctgggacgccaccgaggtcatcgccgagctcaag
aagtccaaggccgttgtcatcgtggcagcggacctgctcgctctgacgctgctgaagtcc
ccgggcgagatgggcgccgatgtcgtcatgggcacctcccagcgcttcggtgttccgctc
ggcttcggtggtccgcacgccgcgttcgtggccgtcaacgacgacctcaagcgccagctg
ccgggccgcctggtgggcatctccaaggacgccgacggcaaccccgcgtaccgtctgtcc
ctgcagacccgcgagcagcacatccgtcgtgagaaggcgacctcgaacatcaccaccgcg
caggtactcctcgcggtgatggcatcgatgtacgccgtctaccacggcccggacggcctg
accgccctggcgcgtcagaccgccgaccgcaccgcgaccctcgccgcatggctgaaggac
gccggcttcaccctgaagcacgaagcgttcttcgacaccctgcgcatcgaggcaccgggc
agggccaaggacatctacgaggccttcaagaaggccgagatgctcatccacgtcgtcgac
gatgacaccgtgcagctgtcgctggacgagaccgtcaccgccgaggacctgaaggccatc
gccggcgtgttcggcgagttcggctccgccaagggcgagatcgaggacggcgccgtgaag
agcggcgacgcatggggcggcctcgtgcgcgagacctccttcctgcagcacccggtcttc
cagtcgttccactccgagaccgcgatgatgcgctacctgcgtcgtctctcggaccgcgac
tacggcctggaccgcggcatgatcccgctgggctcctgcacgatgaagctcaactccgcc
accgagatggctgcgatcacctggccggagttcaactccgtccacccgttcgcgcccgtc
gaggacgtggagggctacctcgagatgatcactcagctggaggagtggctcgccgacctc
accggctacgacaccgtctccctgcagccgaacgccggctcccagggtgaggtcgccggt
ctgctggcgatcaaggcgtaccacaactcgcgcggcgaatcgcagcgcgacgtctgcgtc
gtgccgtcctccgcgcacggcacgaacgccgcttcggctgcgatcgtcggcatgcgcgtg
gtggtcgtcgcctcggacgccaacggcaacatcgacgtcgacgacctcaagcagaagatc
aaggaccacggcgatgagctcgccgcgatcatgatcacctacccgtccacgcacggcgtg
tacgagtccgaggtccgcaccatctgccagctggtgcacgatgccggcggtcaggtgtac
gtcgacggtgcgaacgcaaccgcgctgctgcaggtcgcccgcccgggcgagttcggcggc
gacgtctcgcacctgaacctgcacaagaccttctgcatcccgcacggcggcggcggcccg
ggcgtcggtccggtcgcagccaaggcgcacctcgctccgttcctgccgggtcacccgcag
atccagaagccggagcatccggtggtgggcgaaggcgagcaggtgcacggcggcgctccg
gtgtcgcaggcaccgtacggctccgcgtcgatcctgccgatctcctgggcgtacatccgc
atgatgggcgccgagggcatccgccacgccaccagctccgccgtgctcggcgcgaactac
ctggcgaagcgcctcagcgagaagttcgagatcctgtacacgggtgagaacggcctcgtg
gcccacgagtgcatcgtggacctgcgtccgttcaccgcccgcacgggcatcaccgtggac
gatatggccaagcgcctcatcgactacggcttccacgctccgaccatgagcttcccggtt
gcgggcacgttcatggtggagccgacggagtccgaggacctgcaggagctcgatcgcttc
gccgacgctatgctcgccatgtacgacgaggctgagaaggtcctctccggcgagtggccg
aaggacgacaacccgctggtcaacgctccgcacaccgctgagtgcgcatcggcatccgag
tgggagcacccgtactcccgcgaggtcgccgtctacccgggcgtggacaacagcgaggac
gtcaagggctgccactcgaaccgcgccatgcgcatccaggccaagtactggccggttgtg
cgccgcatcgagcaggccttcggcgaccgcaacctcgtccccacctggggtgacttctcc
ggcaccgtcggcggcgagtga
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