Helcobacillus massiliensis: R3I40_06500
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Entry
R3I40_06500 CDS
T09498
Symbol
dnaK
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R3I40_06500 (dnaK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmm03019
]
R3I40_06500 (dnaK)
03110 Chaperones and folding catalysts [BR:
hmm03110
]
R3I40_06500 (dnaK)
03029 Mitochondrial biogenesis [BR:
hmm03029
]
R3I40_06500 (dnaK)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmm04147
]
R3I40_06500 (dnaK)
Messenger RNA biogenesis [BR:
hmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R3I40_06500 (dnaK)
Chaperones and folding catalysts [BR:
hmm03110
]
Heat shock proteins
HSP70 / DNAK
R3I40_06500 (dnaK)
Mitochondrial biogenesis [BR:
hmm03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
R3I40_06500 (dnaK)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
R3I40_06500 (dnaK)
Exosome [BR:
hmm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R3I40_06500 (dnaK)
Exosomal proteins of breast cancer cells
R3I40_06500 (dnaK)
Exosomal proteins of colorectal cancer cells
R3I40_06500 (dnaK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
ParM_N
SBE2_N
PA14
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
WOO92061
LinkDB
All DBs
Position
complement(1405041..1406909)
Genome browser
AA seq
622 aa
AA seq
DB search
MSRVVGIDLGTTNSCVAVLEGGEPQVIANAEGARTTPSVVAFSKQGEVLVGELAKRQAVT
NVDRTIASVKRHMGTDWSTEVDDKKYTAQEISARILGKLKRDAESYLGDQVTDAVITVPA
YFNDSERQATKDAGQIAGLNVLRIINEPTAAALTYGLEKGKDDERILVFDLGGGTFDVSL
LEISKDEDGSAIQVVATAGDNRLGGDDWDQKIVDWLTQQVKNKEGVDLSKDRIALQRLKE
AAEQAKKELSSSSSTNISLQYVSMSENGPVHLDETLSRAQFEDMTSDLLDRTKAPFHQVI
KDAGVSVSDIDHVVLVGGSTRMPAVTEVVKELTGGKEPNKGVNPDEVVAMGAALQAGVIK
GDRKDVLLMDVTPLSLGIETKGGVMTKLIERNSAIPTKTSEVFSTAEDNQPSVAIQVFQG
ERQFTRDNKLLGTFELTGIAPAPRGMPQIEVTFDIDSNGIVHVTAKDRGTGNEQSIQITG
GSGLSDEEIDRMVKDAEAHAAEDAERRKTADARNGLEQTAYQGEKLLKDNGDKVSDADKT
AAEDAIKEAKEVLAKEDAKADELEAAQTKLNEALQAVGTAIYSQAQAADGAEGAAGADAA
GESSDEDVVDAEIVDDEDEENK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgttgttggtatcgacctcggaaccacgaactcctgcgtcgcagtcctcgag
ggcggcgagccccaggtcatcgcgaacgccgaaggcgcccgcaccaccccgtcggtggtc
gcgttctccaagcagggcgaagtcctcgtcggcgagctggccaagcgccaggcggtcacc
aacgtggaccgcaccatcgcctctgtgaagcgccacatgggcaccgactggagcacggag
gtcgacgacaagaagtacaccgcgcaggagatctccgcgcgcatcctcggcaagctcaag
cgcgacgccgagtcctacctcggtgaccaggtgaccgacgcggtcatcaccgtccccgcg
tacttcaacgactccgagcgccaggccacgaaggacgccggtcagatcgccggcctgaac
gttctgcgcatcatcaacgagcccacggccgcggccctcacctacggcctcgagaagggc
aaggacgacgagcgcatcctcgtgttcgacctcggcggcggcaccttcgacgtctccctc
ctcgagatctccaaggacgaggacggctccgccatccaggtggtcgccaccgccggtgac
aaccgcctcggcggcgacgactgggaccagaagatcgtcgactggctgacccagcaggtg
aagaacaaggagggtgtggacctctccaaggaccgcatcgccctgcagcgcctgaaggaa
gcagcggagcaggcgaagaaggagctgagctcctcctcctcgaccaacatctccctgcag
tacgtgtcgatgagtgagaacggccccgtccacctggacgagaccctctcccgcgcacag
ttcgaggacatgacctcggacctgctcgaccgcaccaaggcaccgttccaccaggtcatc
aaggacgccggcgtgtccgtctccgatatcgaccacgtggtcctggtcggcggctccacc
cgcatgccggccgtgaccgaggtcgtcaaggagctcaccggcggcaaggagccgaacaag
ggcgtcaaccctgatgaggttgtggcgatgggcgcagccctgcaggccggcgtcatcaag
ggcgaccgcaaggacgtcctgctcatggacgtcaccccgctgtccctcggcatcgagacc
aagggcggtgtgatgaccaagctcatcgagcgcaactccgcgatcccgacgaagacctcc
gaggtgttctccaccgctgaggacaaccagccgtccgtggccatccaggtgttccagggc
gagcgccagttcacccgcgacaacaagctgctcggcaccttcgagctgaccggcatcgca
ccggcgccgcgcggcatgccgcagatcgaagtcaccttcgacatcgactccaacggcatc
gtccacgtgaccgccaaggaccgcggcacgggcaacgagcagtccatccagatcaccggc
ggctccggcctctccgatgaggagatcgaccgcatggtgaaggacgccgaggcacacgcc
gcggaggacgccgagcgccgcaagaccgccgacgcccgcaacggcctcgagcagaccgcc
taccagggcgagaagctgctcaaggacaacggcgacaaggtctccgatgcggacaagacc
gccgctgaggacgcgatcaaggaggccaaggaggtcctcgccaaggaggacgccaaggct
gacgagctcgaggccgcgcagacgaagctgaacgaggctctgcaggccgtgggcaccgcg
atctacagccaggcccaggcggccgacggcgccgagggcgctgccggtgccgatgccgca
ggcgagtcctccgatgaggacgtcgtggacgccgagatcgtcgacgatgaggacgaggag
aacaagtga
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