Helcobacillus massiliensis: R3I40_08240
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Entry
R3I40_08240 CDS
T09498
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R3I40_08240 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmm03019
]
R3I40_08240 (groL)
03110 Chaperones and folding catalysts [BR:
hmm03110
]
R3I40_08240 (groL)
03029 Mitochondrial biogenesis [BR:
hmm03029
]
R3I40_08240 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmm04147
]
R3I40_08240 (groL)
Enzymes [BR:
hmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R3I40_08240 (groL)
Messenger RNA biogenesis [BR:
hmm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R3I40_08240 (groL)
Chaperones and folding catalysts [BR:
hmm03110
]
Heat shock proteins
HSP60 / Chaperonin
R3I40_08240 (groL)
Mitochondrial biogenesis [BR:
hmm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R3I40_08240 (groL)
Exosome [BR:
hmm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R3I40_08240 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R3I40_08240 (groL)
Exosomal proteins of breast cancer cells
R3I40_08240 (groL)
Exosomal proteins of colorectal cancer cells
R3I40_08240 (groL)
Exosomal proteins of bladder cancer cells
R3I40_08240 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SOR
Motif
Other DBs
NCBI-ProteinID:
WOO92401
LinkDB
All DBs
Position
complement(1773532..1775121)
Genome browser
AA seq
529 aa
AA seq
DB search
MAKDIIYDEDARRALERGVDRLADTVKVTLGPKGRNVVLDKKWGAPTITNDGVTIAREVE
LEDPFEDLGAQLAKEVATKTNDVAGDGTTTATVLAQALVHEGLRNVASGAAPAGLKRGME
KAVQALSDRLAENAIEISSKDQIASVAAVSSQDREIGELLAEAFEKVGKDGVITVEESST
TALELDFTEGMQFDKGFISPHFVTDADRQEVVLEDAYVLINQGKISNVQDLLPLLEKVVE
TGKPLFIISEDVEGEALATLVVSKLRGSFKGAAVKAPAFGDRRKAMMQDIATLTGAQVIT
PDLGLDLKTATLADLGTASRVVITKDATTIVGGAGDDEAVADRVAQIKSEIQNTDSDWDR
EKLQERLAKLSGGVSVIKVGAHTEVELKEKKMRIEDAVAATRAAIEEGIVSGGGSAIVQA
ATVLEDDLGLEGDEAVGVRAVAKAVVEPLRWIAENAGLEGYVVVEKVKQAPIGTGLNAAT
EEYEDLAAAGIIDPVKVTRNALRNAASIAGLVLTTETLVVDKREDEDED
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagacatcatctacgacgaggacgcacgccgcgcgctcgagcgcggcgtcgac
cgcctcgccgacaccgtcaaggtgaccctcggccccaagggccgcaacgtcgtcctcgac
aagaagtggggcgcccccaccatcaccaacgacggcgtgaccatcgcccgcgaggtggag
ctcgaggacccgttcgaggatctcggcgctcagctcgccaaggaggtcgccaccaagacc
aacgacgtcgccggtgacggcaccaccaccgcaacggtcctcgcccaggcgctcgtccac
gagggcctgcgcaacgtggcctccggcgctgccccggccggcctcaagcgcggcatggag
aaggccgtccaggcgctctccgaccgcctcgctgagaacgccatcgagatctcctcgaag
gaccagatcgcgagcgtggccgccgtgtcctcccaggaccgcgagatcggcgagctgctc
gccgaagcgttcgagaaggtcggcaaggacggcgtcatcaccgtggaggagtcctccacc
acggcgctggagctggacttcaccgagggcatgcagttcgacaagggcttcatctccccg
cacttcgtcaccgatgcggaccgccaggaagtcgtcctcgaggacgcctacgtcctgatc
aaccagggcaagatctccaacgtgcaggacctcctgccgctgctggagaaggtcgtcgag
accggcaagccgctgttcatcatctccgaggacgtcgagggcgaagccctcgccaccctc
gtggtctccaagctgcgcggctccttcaagggcgccgccgtgaaggccccggccttcggc
gaccgccgcaaggccatgatgcaggacatcgccaccctcaccggtgcgcaggtcatcacc
ccggacctcggtctggacctgaagaccgccaccctggctgatctcggcaccgcctcgcgc
gtcgtcatcaccaaggacgccaccaccatcgtcggcggcgccggcgatgacgaggccgtg
gccgaccgcgtcgcccagatcaagtcggagatccagaacaccgactccgactgggaccgc
gagaagctgcaggagcgcctcgcgaagctgtccggcggcgtgtccgtcatcaaggtcggc
gctcacaccgaggtggagctcaaagagaagaagatgcgcatcgaggatgctgttgcggcc
acccgcgcagcgatcgaagagggcatcgtctccggcggcggctccgccatcgtgcaggca
gccaccgtgctcgaggacgacctcggcctcgaaggcgatgaagcagtcggcgtgcgcgct
gtcgccaaggccgttgtggagccgctgcgctggatcgccgagaacgccggcctcgaaggc
tacgtcgtggtggagaaggtcaagcaggcgccgatcggcaccggcctgaacgccgccacc
gaagagtacgaggatctggcggcagccggcatcatcgacccggtgaaggtgacccgcaac
gccctgcgcaatgcggcctccatcgccggtctcgtgctcaccaccgagaccctcgtggtc
gacaagcgcgaggacgaggacgaggactga
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