Helcobacillus massiliensis: R3I40_08545
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Entry
R3I40_08545 CDS
T09498
Name
(GenBank) YPDG domain-containing protein
Organism
hmm
Helcobacillus massiliensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RibLong
Big_6
Rib
Big_15
He_PIG
aRib
Tudor_3
Motif
Other DBs
NCBI-ProteinID:
WOO92459
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All DBs
Position
1839501..1842212
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AA seq
903 aa
AA seq
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MRRAVAAAGTTALLVGTFGATATVSVAAPTSQQAAALAPAAAPTDQPGSSQANAIPADAL
ANGYIKNETDMTNAKNTLSGRAFISDRGTPATTGNELSAVPEGTEVYLQWIDKDGAVSPW
YSAKTSNSLPGDDSGQAGNGSYAFDLRKGWTDAKGKKHTYNATDGQYYKLVIPDSTNPAT
GNTITMMRQAGGFFPGSFVNSVTHSNLGQFPLIGTNMQRTGVFMTEQGGTYMHRPQAEWI
TDSKGPLSAPWTDLQAKNSVSGQVWLETGDGDYANSATGPNNNTKDPEAAGYTVVMSSLT
SEGAQAYKAQVESLDKSQRAAAAAKLLKAHPEYISATVQGKTNDQGRYTLRFPDGKLNDQ
YLYMQVFDKQGELVNGYSGYTSPEFRKPNANVSFTPQAAPAQNLVARPMWYNVNYAIVAR
TDVDLQITNYDVTENPARPGDTAELDFTGVMPPLASKIEWVDSNGKIVKTCDPVTSEAEA
EACTFQVPADAPDGMVYTARLVSGGNIIAGDSFIVDLTPITDNLTPAYEDTTVEEGKGGT
VPTPTYTDADGNPATAPEGTKYEPNGDLPDGFTVNEDGSITIDPSVPAGDYTIPVLVTYP
DGSTDTVDAKVTVTEAPAEKPDWNDDKGKPGETVTIPNEGGEVPDGSTVETDGPGKGRID
DEGNLVVDINDDAKPGDKITVVVKDKDGNVIDEITVTVGEKPADKPDWNDDKGNPGDTVT
IPNEGGPVPDGTTVETEGPGKGRIDDEGNLVVDINDDAKPGDKITVVVKDKDGNVIDTIT
VTVGEKPGNGGDGGDGGDGGDGGDGGNGGNGGDGGNGGSGGNGGDGGNGGDGGNGGTTQP
GNGGSGTPGNGGSNAPSQGQDQSHAPSGDLARTGAQVGGLLAAAAAFVAAGTAMVTRRRK
GDR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgtgcagttgccgcagccggcactactgctctcctcgtgggcactttcggcgca
accgcaacagtttcggttgctgcaccgaccagccagcaggccgcggctctcgcaccggcc
gccgcgccgactgaccagcccggcagctctcaggccaacgccatcccggccgacgcgctc
gccaacggctacatcaagaacgaaaccgatatgacgaacgcgaagaacaccctgtcgggt
cgtgcgttcatctcggacaggggcaccccggcgaccaccgggaacgagctctcggctgtt
ccggagggcaccgaggtctacctgcagtggatcgacaaggacggcgccgtctccccgtgg
tactccgcgaagacttcgaactctctgcccggcgatgacagcggccaggccggcaacggc
tcctacgcgttcgacctgcgtaagggctggaccgacgcgaagggcaagaagcacacgtac
aacgccaccgacggccagtactacaagctggtgatcccggacagcaccaacccggccacc
ggcaacaccatcaccatgatgcgccaggccggcggtttcttccccggctcgttcgtcaac
tcggtgacccacagcaacctgggtcagttcccgctgatcggcacgaacatgcagcgcacc
ggcgtcttcatgacggagcagggcggcacctacatgcaccgcccgcaggccgagtggatc
acggactccaagggtccactctcggccccttggaccgacttgcaggcaaagaactcggtg
tccggtcaggtgtggctggagaccggtgacggtgactacgccaactcggcgaccggcccg
aacaacaacaccaaggatcccgaggccgctggctacacggttgtgatgtcgtcgctgacc
tccgagggcgctcaggcctacaaggctcaggtggagtccctcgacaagtcccagcgcgcc
gctgccgcggccaagctgctgaaggcccacccggagtacatctccgcgactgtgcagggc
aagaccaacgatcagggtcgctacacgctgcgcttcccggacggcaagctgaacgaccag
tacctgtacatgcaggtcttcgataagcagggcgagctcgtcaacggctactccggctac
acctcccccgagttccgcaagccgaatgccaacgtgtcgttcaccccgcaggcggccccg
gcacagaacctcgtggcgaggccgatgtggtacaacgtcaactacgccatcgtggctcgg
actgacgttgacctgcagatcaccaactacgacgtgacggagaacccggctcgcccgggt
gacaccgccgagctcgacttcaccggtgtcatgccgccgctcgcttccaagatcgagtgg
gttgactccaacggcaagatcgtcaagacctgcgacccggtgacctccgaggctgaggct
gaggcctgcaccttccaggtgcccgccgatgctccggacggcatggtgtacaccgctcgc
ctcgtctccggcggcaacatcatcgcgggcgactccttcatcgtcgatctgactcccatc
accgacaacctgaccccggcctacgaggacaccacggtcgaggagggcaagggcggcacc
gtgccgaccccgacctacaccgatgccgatggcaacccggccaccgcacctgagggcacc
aagtacgagccgaacggcgacctgcccgacggcttcaccgtgaacgaggacggttccatc
accatcgacccgtccgtcccggccggtgactacaccatcccggtgctcgtcacctacccg
gacggctccacggacaccgtcgatgccaaggtcaccgtgaccgaggctccggctgagaag
ccggactggaacgatgacaagggcaagccgggcgagaccgtgaccatcccgaacgagggt
ggcgaggttccggacggctccaccgttgagaccgacggccccggcaagggccgcatcgat
gacgagggcaacctcgttgtcgacatcaacgatgacgccaagcccggtgacaagatcacc
gtcgtggtcaaggacaaggacggcaacgtgatcgacgagatcacggtcaccgtcggcgaa
aagcccgccgacaagccggactggaacgacgacaagggcaacccgggcgacaccgtgacc
atcccgaacgagggtggcccggttccggacggcaccaccgttgagaccgaaggccccggc
aagggccgcatcgatgacgagggcaacctcgttgtcgacatcaacgatgacgccaagccc
ggtgacaagatcaccgtcgtggtcaaggacaaggacggcaacgtcatcgacaccatcacc
gtcaccgtcggcgaaaagccgggtaacggtggagatggtggcgacggcggcgacggtgga
gacggcggcgacggcggcaacggcggcaacggcggagacggcggcaacggcggctccggt
ggtaacggcggagacggcggcaacggtggcgacggcggtaacggcggcaccacccagccg
ggcaacggcggctccggtacgccgggcaacggcggcagcaatgccccgagccagggccag
gaccagagccacgctccgagcggcgacctggcacgcaccggtgcccaggtcggcggcctc
ctcgcggcagctgcagcgttcgtcgctgcgggtaccgccatggtgacccgccgccgcaag
ggcgaccgctga
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