KEGG   Helcobacillus massiliensis: R3I40_08630
Entry
R3I40_08630       CDS       T09498                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hmm  Helcobacillus massiliensis
Pathway
hmm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hmm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    R3I40_08630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmm03400]
    R3I40_08630
Enzymes [BR:hmm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     R3I40_08630
DNA repair and recombination proteins [BR:hmm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     R3I40_08630
 Prokaryotic type
     R3I40_08630
SSDB
Motif
Pfam: UDG PTHB1_CtH
Other DBs
NCBI-ProteinID: WOO92474
LinkDB
Position
1861031..1861759
AA seq 242 aa
MPDHEPQPPTQPAAGASPGSKPLREIIDPDWARALADVEPVVHRMGDFLRAEQAAGRGFL
PAGDAILRAFTTPMPQVRVLIVGQDPYPTPGHPIGLSFAVNPDVRPIPRSLVNIYQELRD
DLGVPTPDHGDLSAWQDQGVLLLNRCLTVQPGAPASHRGKGWEEVTDAAIRALVAREEPL
VAILWGRDARSLKPLLGDTPTVESAHPSPLSARRGFFGSRPFSTANRLLQEQGAHPIDWA
LS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcctgaccacgaaccccagccgcccactcagcccgccgccggtgcatcgcccggctcg
aagccgctgagggagatcatcgaccccgactgggcccgcgccctcgcggacgtcgaaccc
gtcgtgcaccgcatgggtgacttcctgcgcgccgagcaggccgccgggcgcggcttcctc
cccgccggggacgcgatcctgcgagccttcaccacgccgatgccacaggtgcgggtgctg
atcgtgggacaggacccctaccccacccccggccacccgatcgggctgagcttcgcggtc
aaccccgacgtgcggccgatcccgcggtcgctcgtgaacatctatcaggagctgcgggac
gacctcggcgtccccactcccgaccacggcgacctcagcgcctggcaggaccagggcgtg
ctcctgctcaaccggtgcctcaccgtgcagcccggcgcacccgccagtcaccgcgggaag
ggatgggaggaggtcaccgatgcggcgatccgcgcgctcgtagcccgcgaggagcccctg
gtggcgattctgtgggggcgcgacgcccgctcactgaagccgctgctgggcgacacgccg
actgttgagtccgcgcacccgtcaccgctgtcggcgcggcgcggattcttcgggtcccgg
ccgttctccaccgcgaaccgtctgctgcaggagcagggcgcgcaccccatcgactgggca
ctctcctga

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