Helcobacillus massiliensis: R3I40_08980
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Entry
R3I40_08980 CDS
T09498
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hmm
Helcobacillus massiliensis
Pathway
hmm03030
DNA replication
hmm03430
Mismatch repair
hmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R3I40_08980
03430 Mismatch repair
R3I40_08980
03440 Homologous recombination
R3I40_08980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmm03032
]
R3I40_08980
03400 DNA repair and recombination proteins [BR:
hmm03400
]
R3I40_08980
Enzymes [BR:
hmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R3I40_08980
DNA replication proteins [BR:
hmm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R3I40_08980
DNA repair and recombination proteins [BR:
hmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R3I40_08980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_14
AAA_18
AAA_16
Rad17
AAA_19
ResIII
Mg_chelatase
DEAD
zf-CXXC
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WOO92542
LinkDB
All DBs
Position
complement(1944607..1948020)
Genome browser
AA seq
1137 aa
AA seq
DB search
MATTALYRRLRPESFAEVIGQDHVTEPLRRALRANRVGHAYLFSGPRGCGKTTSARILAR
CLNCAEGPTDTPCGTCDSCRDLARDGAGSLDVVEIDAASHGGVDDARELRERASFAPVRD
RFKVFIIDEAHMVTSAGFNALLKLVEEPPEHVKFIFATTEPDKVIGTIRSRTHHYPFRLI
PPQVLLPYLEEICRQENVPVGEGVLSLVIRAGGGSARDTLSVLDQLMAGSDERGLDVELT
AALLGFTDIELMNRATLAIAETDANALFTAIDEVIGSGHEPRGFVEDLLARFRDLIVLTA
APDHAAELLPDVPVDQLEALMEQAQRFQPRELTDCAEIVSAALDAMSGATAPRLHLELLA
AKLMLRGQAAPQAGHAQGLTGVAAGGSAAGRAGGAGAAGGSQGPTGAGSGGSARERAMQV
ARAQAEASRNRRAQAEQQMPGGGAPPQAPAESQQAPARSALPAQSAAPAPSAPSAAPGQS
AAPAPAADADDWGPVAQPGGGGAQAISPSSGQSAPAQQNSQGGGQQAASTGANGQRPAEQ
STSQPSARQASAVQPSAVQASAVQPSAAQQAAQQPSAAQPPAEGGSAPGGAERIEQHWSA
IMDQLQSIRRPSWALIAQNGTVHSFDGTQLVLAFRSTGLVAAFYRGTAQQNMAEAVKKIT
HLDVTVEATAGGEMPPSGSAGRPAAGGPAASDPSGGPAAGGPQGQGGPNQGGMHRGGQQA
GRGPQGQGGGPTGAAGTGPGSQNTTSSGGAQSASPQAGDDGGWGDVVVNRPPSEAAPPQQ
ASVPAKAAEPAPVQSAAPSAPSAAPAQWGDAAGDASPSPRAADHESVAPTANASAQSTPA
PSAPPAPQGSAGEDSFIDEEPPFDPYHDDFPADDGYAAHSERGASAAAQQNAAQAPASRG
ADERPAPAKPAAIDPVSLPPQPGEDEPRTHGQGELVAAMREAYGADFAPSATLVIGSDDA
GAQADADAQDAPPAGPASPAADPGPAPFGDTSAGTGAASPEPASWGDAVVAQPPAAEPPS
APGSTSGPSSAPAATQVGPAAGQQGRPLSGADLARAAARQNLANARGRGPGTAGAGNPSV
SSAAAPIDDDPFGGASRDDADATGPSTSRRPGRDIVEQVLGGEVLEVIDETQNTDAY
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
gtggctactactgctctgtatcgtcgtctccgtccggaatccttcgccgaggtcatcggc
caggaccatgtgaccgaaccgctgcgccgcgcgctgcgcgcgaaccgcgtcggccatgcc
tacctcttctccgggccgcgcggctgcggcaagaccacctcagccaggatcctggcgcgc
tgtctgaactgcgcggagggccccacggacactccctgcggcacctgcgattcgtgccgt
gacctggcccgggacggcgccggcagcctcgacgtggtggagatcgacgccgccagccac
ggtggtgtggacgatgcgcgcgaactgcgcgaacgcgcctcgttcgcgccggtgcgggac
cggttcaaagtgttcatcatcgacgaggcccacatggtcacctcggcggggttcaacgcg
ctgctgaagctggtggaggaaccgccggagcatgtgaagttcatcttcgcgacaacggag
ccggacaaggtcatcggcacgatccggtcgcgcacccaccactacccgttccggctgatc
ccgccgcaggtcctgctgccgtacctggaggagatctgccggcaggagaacgtgccggtg
ggcgagggtgtgctgtcccttgtgatccgcgcgggcggcggcagtgcccgcgacactctg
tcggtgctggaccagctgatggcgggctcggatgagcgcggcctcgatgtggagctgacg
gcggcgctgctcggcttcaccgatatcgagctgatgaaccgggcgaccctcgcgatcgct
gagacggatgcgaacgcactgttcacggcgatcgatgaggtgatcggctcgggccatgag
ccgcgcgggttcgtggaggacctgttggcacgcttccgcgacctgatcgtgctgacggcg
gcgccggaccatgcggcggagctgctgccggatgtgccggtggaccagctggaggcgctg
atggagcaggcgcagcggttccagccgcgggagctgacggactgcgcggagatcgtctcg
gcggcgctggatgcgatgtcgggggctacggcgccgcggctgcacctggagctgctggcg
gcgaagctgatgctgcgcggtcaggcggcgccgcaggcgggtcatgctcaggggctgacg
ggggtcgctgcgggcgggtccgcggccggtcgcgctggcggtgccggtgcggcgggtggc
tcgcaggggccgacgggtgccggctccggcgggtcggcacgggagcgtgcgatgcaggtg
gcgcgtgcgcaggcggaggcgtcgcggaaccgtcgggcgcaggcggagcagcagatgccg
ggcggcggcgcgccgccgcaggcgccggccgagagccagcaggcgcccgcccggtcagcc
ctgcctgcccagtccgcggcgcccgcaccttccgccccctccgcggcgcctggccagtcc
gcggcgcccgccccggccgcggatgctgatgattggggacctgtcgctcagcccggcggg
ggaggggctcaggcgatctccccgtcgagcggccagtccgcgccggcgcagcagaacagc
cagggcggcggccagcaggccgcatcgaccggcgcgaacggtcagcgccctgccgagcag
agcacatcccagccgagcgctcgccaggccagcgccgtgcagcccagtgctgttcaggcc
agcgccgtgcagccgagcgctgcccagcaggcggcgcagcagccgagtgccgcgcagcct
cccgccgagggcggctctgcacccggcggggcggagcgcatcgagcagcattggtcggcg
atcatggaccagctgcagtcgatccgtcggccgtcctgggcgctgatcgcgcagaacggc
accgtgcattcgttcgacggcactcagctcgtcctcgcgttccgctccaccggcctggtg
gcagcgttctaccgcggcaccgcccagcagaacatggccgaagcggtcaagaagatcacc
cacctcgacgtgaccgtggaggccacggccgggggagagatgcccccatcgggtagtgcc
ggacgcccggcggcgggcggcccggcggctagcgacccgagcggcgggcccgcagccggc
ggcccgcaggggcagggtggcccgaaccagggtggaatgcaccggggcgggcagcaggct
ggtcgcggaccgcaggggcagggcggcgggccgacgggtgccgctggcactggaccgggc
tcgcagaacacgacgagtagcggtggggcgcagtcggcatctccgcaggcgggcgatgat
ggtggctggggtgacgtcgtggtcaaccgcccgccgagcgaggcagcgcctccgcagcag
gcgtcagtgccagcgaaggcggcagagccagcaccagtgcagtccgccgccccgtcggca
ccctctgctgcacccgcacagtggggcgacgcagccggcgacgcatccccgtcgccacga
gccgcggatcatgagtccgttgcccccactgcgaacgcgtctgcccagtcgactcccgcc
ccgtcggcgccgccggcgccccaggggtcagccggtgaggactccttcatcgacgaggag
cccccgttcgacccctaccacgacgacttccccgccgacgacggctacgccgcccactcc
gagcgaggcgcctccgctgccgcgcagcagaatgccgcgcaggcgcccgcatcacgaggc
gcagatgagcgcccggccccggcgaagcccgcagcgatcgacccagtgagcctcccgccg
cagccgggggaggacgagccgcgcacccacggccagggcgaactcgtcgccgccatgcgc
gaggcgtacggagcggacttcgccccgtcggcgacactcgtgatcggatccgacgatgcc
ggagcgcaggccgatgccgacgcacaggacgcgcccccagcgggccccgcaagccccgcc
gccgaccctggccccgctcccttcggcgacacctccgccggcaccggtgctgcctcgccc
gaacccgcctcctggggcgatgccgttgttgcgcagccgcccgcagccgagccgccctct
gcgcccggctcgacctccggtcctagctcggctccggccgccacgcaggtgggccccgcc
gccggccagcagggccgcccgctgtccggcgccgacctcgctcgcgccgccgcccgacag
aacctcgcgaacgcccgcggccgcggccccggcaccgctggtgcggggaacccgtcggtc
agcagcgccgccgccccgatcgacgacgacccgttcggcggcgcgtcccgcgacgacgcc
gacgccaccggtccctccacgtcacgtcgccccggccgcgacatcgtggaacaggtcctc
ggcggcgaagtcctcgaagtcatcgacgagacgcagaacaccgacgcctactga
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