Helcobacillus massiliensis: R3I40_09940
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Entry
R3I40_09940 CDS
T09498
Name
(GenBank) PDZ domain-containing protein
KO
K08676
tricorn protease [EC:3.4.21.-]
Organism
hmm
Helcobacillus massiliensis
Brite
KEGG Orthology (KO) [BR:
hmm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmm01002
]
R3I40_09940
Peptidases and inhibitors [BR:
hmm01002
]
Serine peptidases
Family S41: C-terminal processing peptidase family
R3I40_09940
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S41
PDZ_Tricorn
Tricorn_C1
PD40
PDZ_6
Motif
Other DBs
NCBI-ProteinID:
WOO92719
LinkDB
All DBs
Position
2169487..2173023
Genome browser
AA seq
1178 aa
AA seq
DB search
MTITPPASTTAVRTDGGAAPSAYLRHPDLHDDLVVFCAADDIWAADLPTTEGPAPHARRL
TDDGVPVSYPRISPDGAHVAFTSSATGAPEVHVVSTDGSADARRLTYWGNRSTRVAGWLE
DGRILVTTGHRAPNTQRDAQLWALDLDGGADLLPFGRAGEMVRHSSGVTVVVTPWRKEPA
HWKHYQGGTAARLWVSREDVPLDAPLSEHAQRTWEPLRDDLLASKTRLAFIGDRLVFASD
TPGEGASLTDRASGNLWSIALDGTDLRRHTDIDSADGYLRDPAVSGERIVFTSRGRLFVK
DSLDAPAREVPVQVSGVGASRRPSLADPAHALIAARPTRDARASVIEWRGSAHVLTHRGG
PARLLAGQCGLRIREASPLGGTGYAVFVTDELAQSDRAPSSADAAGAGGAAAEPVVGSDA
LGVRRLDASSNADVFDLGDVGRILHAVPSADGRRVAISSHDGAVRVVDLDHAGEGADLRI
SLGGVRNIAHSTGGEVADLAISPDSRWLVWSEPNSWHLSRLMIADLEEKDPVGRPLTSGA
FREAHPAFSADGKHLAFVSSRTLDTVYDDLVFDLAFVNAQRPHLLPLDRATEDPFGPRVD
GWAATAAEAKPDEAGSTAGRPGADGAAAMQADGTTAAAGPQSPAAAPTTTVDLDGAEQRI
LPFPVESGRISQLQAVKDGFVWLRHPQETVIGSTRAGVEGDAPKPTLEMWNLKDRRLLTL
AEGVDQVEASGDGEHLVIRQGDALVQIPSARTTEEDDPARIEIDTSRLRLMVDPVAERLG
MLWDNYRIMAQQFWRADMDGQDWHAMTSWYEDVVPRLVTQSDVVDMMWEVVGELGTSHAY
VTPAEVDVERPPMPGLLGAELVRDGDAWVIERILTGDSSDPASRCPILAPGVAAQVGDRI
VQVDGRDVDPAQGPAPLLVGTADRPTELVLERPGATGADARRRVVVVPTGDEHDLRYQSW
VQSRREFVAERSGGRLGYLHIPDMMSGGWAQMHRDLRAASEKEGIVVDVRYNSGGHTSQL
VTDRLARRVVSWDYPRHQEPGTYPAFAPRGPIALVTNQDAGSDGDIVNAVSQAMGIGPVI
GTRTWGGVIGIDGRFDLVDGTGITQPKYASWFEGKDWGIENYGVDPDIEVPIPPSAWVAG
EDPQLARGVDEVLAALTDRPAAVAPPLPPARYGDGGAA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcacgcctcctgcttcgacgactgctgttcgaaccgatgggggcgctgccccg
tcggcctacctccgccatccggatctgcacgatgacctggtggtcttctgcgccgccgac
gacatctgggccgctgacctccccaccacggaggggccggccccgcatgcgcggcgcctc
accgacgacggcgtgcccgtctcctacccccgcatctcccccgacggcgcccatgtcgcc
ttcacctccagcgccaccggcgcccccgaggtgcatgtggtctccaccgacggctccgcc
gacgcccgccgcctcacctattggggcaaccgcagcactcgagtcgccgggtggctggag
gacggccggatcctcgtcaccactggtcaccgcgccccgaacacgcagcgcgacgcacag
ctgtgggccctcgacctcgacggcggcgccgacctgctgccgttcggccgcgccggcgag
atggtgcggcactcctccggcgtgacggtggtggtgacgccgtggcggaaggagccggcg
cactggaagcactaccagggcggcaccgcggcgcgcctatgggtctcccgagaggacgtc
ccactcgatgccccgctgtccgagcacgcgcagcgcacgtgggagccgctgcgcgacgac
ctgctcgcctcgaagacccgcctggcgttcatcggcgaccgtctcgtgttcgcctccgac
accccgggcgaaggcgcctccctgaccgatcgtgcgtccgggaacctgtggtcgatcgcg
ctggatggaaccgatctgcgccgccacaccgacatcgacagcgccgacgggtacctgcgc
gacccggccgtgtccggtgagcggatcgtattcacctcccgcggtcgactgttcgtgaag
gactccctcgatgcgcccgcccgggaggttccggtacaggtcagcggtgtgggcgcgtcc
cgtcggccctccctggcggacccggcgcatgcgctgatcgcggcgcggcccacgcgggat
gcgcgcgcatcggtgatcgagtggcgaggcagcgcccatgtgctgacgcaccgcggcggc
ccggcgcgcctgctggcgggacagtgcggcctgcggatccgggaggcgtcaccgctgggc
ggcaccgggtacgcggtgttcgtgaccgatgagctcgcccagtccgaccgcgcccccagc
agcgccgatgcagcgggcgcaggcggtgccgcagctgagccggtcgtcggctccgacgcc
ctcggtgtccgccgtctcgacgcctcctccaacgccgacgtgttcgacctcggcgatgtg
ggccgcatcctccatgccgtcccgtccgccgacggccggcgcgttgcgatcagttcgcac
gacggcgctgtccgcgtcgtcgacctcgaccacgccggcgagggcgctgacctgcgcatc
tccctcggcggggtgcggaacatcgcccactccaccggcggtgaggtcgccgatctggcg
atctctccggattcgcgctggctggtgtggtccgaaccgaactcgtggcatctgagccgg
ctgatgatcgcggacctggaggagaaggaccccgtcggccggcccctcacctccggggcg
ttccgggaggcccacccggcgttctccgcggacggcaagcatctggcgttcgtctccagc
cgcactctcgacaccgtgtacgacgacctcgtgttcgacctcgcgttcgtgaacgcgcag
cgcccgcacctgctgccgctggaccgcgccacggaggacccgttcgggccccgcgtggac
ggctgggcggcgacggcagcggaggcgaagccggacgaggcgggcagcaccgccggccgc
cccggcgctgacggcgctgcggcgatgcaggccgacggcaccacggcggcagccggtccc
cagtccccggctgccgccccgaccaccacggtggacctcgacggcgcggagcagcggatc
ctgccgttccccgtggagtccgggcggatctcgcagctgcaggcggtgaaggacgggttc
gtgtggctgcgccacccgcaggagaccgtcatcggctccacccgcgccggagtggagggg
gacgcgccgaagccgactctggagatgtggaacctgaaggaccgccgcctgctcaccctc
gccgaaggcgtggaccaggtggaggcgtccggtgacggtgagcatctggtgatccggcag
ggcgatgctctcgtgcagatcccgtcggcccgcaccaccgaggaggacgacccggcgcgc
atcgagatcgacacgtcccgcctgcggctgatggtggatccggtggcggagcgcctcggg
atgctgtgggacaactaccggatcatggcgcagcagttctggcgggcggacatggacggg
caggactggcacgcgatgacctcctggtacgaggatgtggtgccgcgcctggtcacccag
agcgatgtcgtggacatgatgtgggaggtggtcggtgagctcggcacctcgcacgcctat
gtgacgcccgccgaagtcgatgtggagaggccgccgatgccgggcctgctgggtgcggag
ctggtccgcgacggggacgcgtgggtgatcgagcggatcctcacgggggattcgtcggat
ccggcgtcgcgctgcccgatcctggcgcccggtgtggcggcgcaggtgggtgaccgcatc
gtccaggtggacggccgtgacgtggacccggcccaggggccggcgccgctgctggtcggc
acggccgacaggccgacggagctggtgctggagcggcccggcgcgacgggtgctgatgcg
cgccgccgcgtggtggtggtgccgacgggtgacgagcatgacctgcggtaccagtcgtgg
gtgcagtcgcgccgcgaattcgtggcggagcgctccggcggccgcctcggctacctgcac
attccggacatgatgtccggcgggtgggcgcagatgcaccgcgacctgcgggcggcgtcc
gagaaggagggcatcgtggtggatgtccgctacaacagcggcggccacacctcgcagctg
gtgacggaccggctggcgcgccgcgtggtgtcctgggactacccgcggcatcaggagccg
ggcacgtatccggcgttcgcgccgcgcggcccgatcgcgctggtgacgaaccaggatgcg
ggctccgacggcgacatcgtgaacgccgtgtcccaggcgatggggatcggtccggtgatc
ggcacccgcacctggggcggtgtgatcggcatcgacggccgcttcgacctggtggacggc
acgggcatcacgcagccgaagtatgcgtcctggttcgagggcaaggactgggggatcgag
aactacggcgtggatccggacattgaggtgcccatcccgccgagtgcgtgggtcgcgggt
gaggatccgcagctggcgcggggcgtggatgaggtgctggcggctctgacggaccgcccg
gctgcggtggctccgccgctgccgccggcccgctacggcgatggcggcgctgcctga
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