Halobacillus mangrovi: HM131_00290
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Entry
HM131_00290 CDS
T04799
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hmn
Halobacillus mangrovi
Pathway
hmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HM131_00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmn03021
]
HM131_00290
03400 DNA repair and recombination proteins [BR:
hmn03400
]
HM131_00290
Enzymes [BR:
hmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HM131_00290
Transcription machinery [BR:
hmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HM131_00290
DNA repair and recombination proteins [BR:
hmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HM131_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
DUF961
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ARI75371
UniProt:
A0A1W5ZQ10
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All DBs
Position
complement(42887..43831)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEITDESTFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIDGVVEDVTTVILNLKKLALKIYSEEEKTLEIDVQGEGKVTAADITHDSDVEV
LNPDLHIATLDSTASLRMRITAERGRGYRPAEGNNHEDLPIGVIPVDSIFTPVSRVTYQV
ENTRIGQTSNFDKLTLDVWTDGSIRPEEAISLGAKIYMEHLNIFVGLTDEAQKAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKSEEDMMKVRNLGRKSLEEVK
HKLDELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccaaaaattgagacggttgagatcaccgatgagtccactttt
ggtaagttcgtcgtagaaccgcttgaacgtgggtatggtacaactctagggaactccttg
cgtcgtatcctattatcctcacttcctggcgctgctgtaacatctgttcaaatcgacggg
gtacttcacgaattctcaactattgatggagtcgtggaggacgtaaccacagtcattttg
aacctaaagaaactagctttgaagatttattctgaagaagaaaagactttagagattgat
gtacagggtgaaggaaaagtaactgcagctgacattacgcacgatagtgatgtggaagtt
ctaaatccagatcttcatatcgctacactagacagcacggctagccttcgtatgcgtatt
acagctgaacgaggccgaggatatcgtccggctgaaggaaataaccatgaagatttacca
atcggcgtaattccagttgactctatttttacgcctgtatcccgtgtgacgtaccaagta
gagaatacaagaattggtcaaacatccaacttcgataaactgacgttagacgtttggact
gacggaagtattcgccctgaagaggcgatctctcttggagccaaaatctatatggaacac
ctcaatatctttgtcggcttgactgatgaagctcaaaaagctgaaatcatggttgagaaa
gaagaggaccaaaaagagaaggttcttgagatgacgatcgaagagcttgacctgtctgtt
cgttcttacaattgcttgaaacgcgctgggattaatacagtgcaggaacttgcgaacaaa
tctgaagaagatatgatgaaggttcgtaaccttggtcgcaagtcacttgaagaagtgaag
cacaaattggatgaactgggattaggtttacgaaaagacgattaa
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