Halobacillus mangrovi: HM131_00465
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Entry
HM131_00465 CDS
T04799
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
hmn
Halobacillus mangrovi
Pathway
hmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HM131_00465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmn03021
]
HM131_00465
03400 DNA repair and recombination proteins [BR:
hmn03400
]
HM131_00465
Enzymes [BR:
hmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HM131_00465
Transcription machinery [BR:
hmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HM131_00465
DNA repair and recombination proteins [BR:
hmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HM131_00465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ARI75406
UniProt:
A0A1W5ZQ40
LinkDB
All DBs
Position
complement(63184..66792)
Genome browser
AA seq
1202 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTKAKVRRERMGHLELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFAAYIVTDPGETALERKQLLSEKEYRSYREKFGQGFQAAMGAEAIRKLLF
DIDLDGEVDTLKEELKTAQGQRRTRAIKRLEVLESFRNSGNDPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPTIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMYQCGLPKE
MALELFKPFVMKELVSRGLAHNIKSAKRKIERVHHEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERQGAVGEGMFFKDLNEALMAYQNGYVHLHTRVAVQ
ASSLNNETFTEEQNQQLLLTTVGKLIFNEMLPSSFPYINEPTQENLEVKTPDQYFVPHGT
DIRKEISSRDEVSPFKKGILGDIIAEVFKRFSISETSKMLDRMKDLGFAYSTKAGITVGV
SDVVVLPEKQEILDEGQEKVDKVMKQFRRGLITEEERYDRVIEIWSAAKDDIQNRLMKSL
DPTNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLTVQSLTEGTEVIEPLI
DRLIGRTAFQTIKHPETGDVLASRNEVIFEDAAKQIVDAGIEKVVIRSAFTCNTKHGVCK
KCYGRNLATGDEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIV
EARNPKGQAVITEIDGTVEEVNEVKEKQEIVVQGSVETRSYTAPYGARLKVSVGDEVKAG
EPLTEGSIDPKELLTVQGLDGVQEYLLKEVQKVYRMQGVEISDKHVEVMVRQMLRKIRVL
DSGDTDVLPGSLLEIHQFKEANQKALMEGGQPAVGRPVILGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMTRYRKIQAQSEASQETAEQPEEVT
QS
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaacaattttgagtatatgaaaattggcttggcttcaccggacaagatt
cgctcttggtcctacggtgaggtcaagaagccagaaacgatcaactatcgtacgttaaaa
ccagaaaaagacggcttattctgtgaacgtatcttcggcccgcaaaaagactgggaatgt
cactgtggtaaatacaaacgtgtccgctataaaggtgtcgtttgtgaccgttgtggtgtc
gaggtaacaaaagcgaaagtacgtcgtgagcgtatggggcacctggaactagctgcccct
gtctctcacatctggtattttaaaggaattccaagtcgtatgggtcttgtcctggacatg
tccccacgcgcattggaagaagtcatttatttcgctgcttatatcgttacagacccaggt
gaaacagctcttgagagaaagcagcttctttccgagaaggaataccgttcctatcgtgag
aagttcggtcaaggtttccaagctgccatgggtgcagaagcgattcgaaagcttcttttc
gatatcgatttggacggtgaagtagatacactgaaagaagaactgaaaacagctcaaggt
cagcgtcgtacgcgtgcaatcaaacgcttggaagttcttgaatcattccgtaactcagga
aacgatccttcgtggatgatcctggatgtgcttccagtcatcccgccagagcttcgtccg
atggttcagttggatggagggcgttttgctacatctgacttgaacgacctttatcgtcgt
gttatcaaccgtaacaaccgtctgaagcgcttgttggatcttggtgcaccgacaataatc
gttcaaaacgagaagcgtatgcttcaggaagctgtcgacgctttgattgataatggtcgc
cgcggccgtcctgtaacaggaccaggaaaccgtccgcttaaatctctttctcacatgctg
aaaggtaagcaaggacgtttccgtcaaaacttacttggtaaacgtgtagactattccggt
cgttccgttatcgttgttggtccttcactgaaaatgtatcaatgtggacttccgaaagaa
atggcacttgagctattcaagccttttgtcatgaaggaacttgtatctcgcggactagcc
cacaacattaagtcagcgaaacgtaaaattgaacgtgtacaccatgaagtgtgggacgtt
ttagaagacgtcatcaaagagcacccggtactattaaaccgtgcaccgacccttcaccgt
ttgggtatccaggcgttcgaaccgactcttgtagagggtcgcgccatccgccttcaccca
ctcgtatgtacagcgtacaacgccgacttcgacggagaccaaatggctgttcacgtacca
ttgtcttcagaagctcaggcagaagcgcgcattcttatgcttgctgctcaaaacatcctt
aatcctaaggatggtaagccggttgttacaccatcacaggatatggtactaggtaactat
taccttactcttgagcgtcaaggggctgtcggtgaaggtatgttcttcaaagacttgaac
gaagctcttatggcgtaccaaaacggatatgtacacttgcatacgcgtgtagctgtacaa
gcaagctcacttaataatgaaacatttactgaggaacagaatcagcagcttctgcttacg
acagtaggtaagttgattttcaacgaaatgctgccttcgtccttcccatatattaatgaa
ccgactcaagaaaaccttgaggttaagactccagatcaatactttgtgcctcacggaacg
gacattcgcaaagaaatttccagccgtgatgaagtatcaccattcaagaagggtatttta
ggagatatcattgcagaagtcttcaaacgattctcaatcagtgaaacttctaagatgctt
gaccgaatgaaagatctagggttcgcttattctacgaaagccggtattacggtcggtgtc
tctgacgtcgtcgtactaccagagaaacaagagattcttgatgaaggtcaagaaaaagta
gataaagtgatgaaacaattccgtcgtggtctgattacagaggaagaacgctatgatcgt
gtcattgagatctggtctgcggctaaagatgacattcaaaaccgcttgatgaaatcctta
gacccgaccaacccgatctttatgatgagtgattccggagcgcgtggtaacgcatctaac
tttacacagttagctggtatgcgtggtctaatggccaacccggctggacgaatcatcgaa
cttccgatcaaatcaagcttccgtgaaggcttgacggtacttgaatactttatttccact
cacggtgcccgtaaaggtcttgccgatacggcccttaagacagctgactcaggttacttg
acccggcgtcttgttgatgttgctcaagatgtaatcgtacgtgaagatgattgtggtaca
gaccgtggattgacagtacaatctcttacagagggtacagaggtcatcgaaccattaatc
gaccgcttaatcgggcgtacagctttccaaacgatcaagcatcctgaaacaggcgatgtt
cttgcaagtcgcaatgaagtcattttcgaagatgcagctaaacaaattgttgatgcaggc
attgaaaaagttgtaatccgttcagcgttcacatgtaacacgaaacatggtgtatgtaag
aagtgttacggacgtaaccttgctacaggtgatgaggttgaagtcggagaagctgtcgga
attatcgcggcacagtccatcggtgaaccaggtacacagcttacaatgcgtaccttccac
acaggtggggtagccggagatgacatcacgcaaggtcttccgcgtatccaggagattgtg
gaagctcgtaatcctaaagggcaagctgttatcactgagatcgacggcacagttgaagaa
gtcaacgaagtgaaagagaaacaggagattgtggtccaaggttctgttgaaacacgttcc
tacacagcaccatacggcgcacgccttaaagtttctgtcggtgatgaggtgaaagccgga
gaaccacttactgaaggttccatcgatccgaaagaactactgactgttcaaggtctggat
ggcgtacaagagtaccttctgaaagaagttcagaaagtttaccgtatgcaaggtgttgaa
atctctgacaaacacgtagaagttatggttcgccagatgcttcgtaaaatccgtgttctt
gactctggagacacagatgtgctgccaggatcactccttgagatccaccagttcaaagaa
gctaaccaaaaagcacttatggaaggtggacagccagcagttggacgtccagttatcctt
ggtattaccaaagcatcgcttgaaacggacagcttcttgtcagccgcatccttccaggag
acaactcgtgtcttgacggatgcagccattaaaggtaagcgtgatgaattgcttggcctg
aaagaaaatgttattatcggtaagcttgttcctgctggtacgggtatgactcgataccgt
aagattcaagcacaatccgaggcgtctcaagaaacagcagagcagcctgaagaagtcaca
caatcctaa
DBGET
integrated database retrieval system