Halobacillus mangrovi: HM131_07825
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Entry
HM131_07825 CDS
T04799
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hmn
Halobacillus mangrovi
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmn03016
]
HM131_07825
Enzymes [BR:
hmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HM131_07825
Transfer RNA biogenesis [BR:
hmn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HM131_07825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
HVSL
FixQ
Motif
Other DBs
NCBI-ProteinID:
ARI76756
UniProt:
A0A1W5ZTX6
LinkDB
All DBs
Position
1616056..1616616
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AA seq
186 aa
AA seq
DB search
MTAHYFIGIKVDKSIRAKLTEWQNVLADSMNYKDWTCEEDFHITLKFLGGCSDKTIETYK
NKLMNEDWTGAFQITIGPAGYFGNPKQPRVFYADAEKPKELEVIKLEIEKIGSELGFQPE
RRTYRPHVTLAKKNAEGKSPLALENYDPLLDESYSMLIDHFSIFRIHPQQKPKYEEIAHI
PLNKEM
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgcactattttattggtatcaaagtggacaaatctataagagctaaattgact
gaatggcaaaatgtgcttgcagattcgatgaactataaagattggacgtgtgaagaagac
tttcatataacattaaagttcttaggaggctgttccgataaaaccattgagacgtataaa
aacaagttgatgaatgaggattggacaggagccttccagataaccatcggtccagctggt
tattttggtaatccgaaacaaccgcgtgtcttttatgctgatgctgaaaagccaaaagaa
ttagaagtaatcaaattagaaattgagaaaataggaagcgagcttggcttccaaccggaa
cgaagaacgtatcgcccacacgtaactttggcaaaaaagaatgctgaaggtaagtctcct
cttgctcttgaaaattatgatcctttattggatgaatcttattccatgttaatcgatcat
ttttccatcttccgtattcatccgcagcaaaagcctaaatatgaagagattgcccatatc
cccctgaataaggaaatgtaa
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