Halobacillus mangrovi: HM131_09385
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Entry
HM131_09385 CDS
T04799
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
hmn
Halobacillus mangrovi
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmn03019
]
HM131_09385
03009 Ribosome biogenesis [BR:
hmn03009
]
HM131_09385
Enzymes [BR:
hmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HM131_09385
Messenger RNA biogenesis [BR:
hmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HM131_09385
Ribosome biogenesis [BR:
hmn03009
]
Prokaryotic type
rRNA helicases
HM131_09385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Flavi_DEAD
Pox_A32
CMS1
DUF7117
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ARI77040
UniProt:
A0A1W5ZUS1
LinkDB
All DBs
Position
1939764..1941083
Genome browser
AA seq
439 aa
AA seq
DB search
MSNHTFQQFAINPTVSQMIEGLGFKEPTPIQQQVLPAALRGESLIGQSHTGSGKTHAYLL
SLFNQLDEKAEHVQFVITAPTRELAIQIHEEVKKAIKHAEKEQVWRSKLVIGGTDKQKMM
DKLSSAPPHIVVGTPGRILDMVKEEAIDLYEAKAFVLDEADLMLDLGFIEEVDQILVRMD
PELQILVFSATIPERLQPFLKKYLKNPTYIQTDDEKPSPESMEHRLIPLRHKAPADVIMD
ITKAIQPYLAIIFTNGKEQADELTNDLLSRGLEVGVIHGGLSPRERKRMLKELQNLRYQY
IVATDLASRGIDIQGVSHVINAQMPKEEEFYIHRVGRTARAGLEGTAINLYKEADLPLIQ
KLEKKGLSFEFYEVKNGEWKEINSYNERQMREKKQTDLEKKAKQMVRKPKKVKPGYKKKM
KQEADKNLKKLKRERYRKK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccatacatttcagcaatttgccatcaaccctaccgtcagtcagatgattgaa
gggttaggatttaaagaaccgacaccgatccagcaacaggttcttcctgcagcattaaga
ggagaaagtttgatcggtcagtctcacacaggatcaggaaaaactcacgcgtatctgttg
tcgttgtttaatcaactggatgagaaggcagagcacgtacaatttgtgatcactgctcca
actagagaacttgctatacaaatacatgaagaagtaaaaaaagcgatcaagcatgcggaa
aaggaacaagtttggcgttccaagcttgtaattggcggaacggataaacaaaaaatgatg
gataagctatcctctgcgcctcctcatattgtcgtaggaactccaggacgaattttggat
atggttaaagaagaagccattgacttatatgaagctaaggcttttgtacttgatgaagct
gatttgatgcttgaccttggatttatagaagaagtcgatcaaatccttgtacggatggat
ccggaattacagattctcgttttctccgccacaatacctgaacgcttacagccttttttg
aaaaagtatttaaagaaccctacgtatattcaaactgatgatgagaagccgtcaccggag
tcaatggaacatcgattaatacctcttcgacacaaagctccggctgatgtcattatggat
attacaaaagccatccaaccttatttggctattatttttacaaatgggaaagaacaagca
gatgagttaaccaatgatttattaagccgcggcctagaggttggagttatccacggtggg
ttatcaccaagagagcgcaagcggatgctgaaggaactgcagaatctgcgttatcagtat
attgtcgcaaccgatctagcttcccgtggtatagatattcaaggtgtcagccatgtcatt
aatgctcaaatgccaaaagaagaagaattttatatccatcgtgtcgggcggacagcgaga
gctggcctagaaggaacggccattaacctctataaagaagctgaccttcctttaatacaa
aaacttgagaaaaaagggttaagctttgagttttatgaagtgaaaaatggagaatggaaa
gaaattaattcttataatgagcgtcaaatgcgagagaagaaacaaacggacctagagaaa
aaagcgaaacagatggttcgtaaaccaaagaaagtaaaaccaggttacaaaaagaaaatg
aagcaagaagctgataagaacttgaagaagttgaaaagggaacgttacagaaagaaatag
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