Halobacillus mangrovi: HM131_10370
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Entry
HM131_10370 CDS
T04799
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hmn
Halobacillus mangrovi
Pathway
hmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HM131_10370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmn03019
]
HM131_10370
03400 DNA repair and recombination proteins [BR:
hmn03400
]
HM131_10370
Enzymes [BR:
hmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HM131_10370
Messenger RNA biogenesis [BR:
hmn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HM131_10370
DNA repair and recombination proteins [BR:
hmn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HM131_10370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Helicase_C_2
SoxY
Motif
Other DBs
NCBI-ProteinID:
ARI77218
UniProt:
A0A1W5ZV99
LinkDB
All DBs
Position
2128135..2129682
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AA seq
515 aa
AA seq
DB search
MQMHEHLSQQLYKHFGFKEFREGQRDIIDDLMKGKDVLGILPTGTGKSLCYQLPALLQSG
VTLVVSPLISLMIDQVKQLKARGFRTVTALNSFMDHNERLKTLNQLSDYSLIYLSPEMLQ
NDRVKQQLFKIKVNLLVVDEAHCISQWGHEFRTDYLKLDQAIKELGDPTVLALSATATPE
VQLDIMEKLNRKDMQKHVYPMDKQNISFAVEQHNGPDDKIERIVQVLSKKQVPTMIYFSS
RQWAEKVSFQLRIRLDQRVAFYHGGMDQTDRMLVQQQFMNNQLDIVCCTSAFGMGVDKSD
IRIVIHFHLPPQLESFIQEVGRAGRDGKPCASLVLFTPKDHYLPQMLIQNELPEQQDVKR
VLKRIQSYRRDKGVLPNVDELLIELEISESQWNFIHHQLERYQVLDGNSILKDPNDENIL
QKLLQFLNERWTYKQNKLTEILHWVHQSECRRQHLYQSFQEEVREPYVPCCDGCGFEVSK
LHFKESKAERMGQTWEDRLRMVFSQEEVHESKETS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcatgagcatctatctcaacaattatataaacattttggatttaaagaattc
agagaaggacagcgcgatatcattgatgatcttatgaaagggaaagatgtattgggaata
ttacctacaggtactggtaaatccctgtgctatcaattgccggctctgttgcaatcagga
gtgacgctggttgtttctcctctcatatctttgatgatagaccaagtgaaacaattaaaa
gcgagagggttcagaactgtaacagcgcttaatagtttcatggaccataatgaaaggcta
aaaactttgaaccaattaagcgattattctcttatctacctttctcctgaaatgctgcag
aatgatcgggtaaagcagcagctgttcaaaataaaggtgaatttactagtagtggatgaa
gctcattgtatctcacagtgggggcatgagttcaggactgattatttgaagcttgatcaa
gccataaaagagctgggggatcccacagttttggcactgagtgcaaccgcaaccccagaa
gtccagttggacattatggagaaactgaaccgtaaagatatgcagaaacatgtctatcct
atggacaaacaaaatatcagttttgctgtagaacaacacaatggtcctgacgataagatt
gaaaggattgttcaggtactttcgaaaaaacaagttcctacaatgatttacttctcaagc
cgtcaatgggcagaaaaagtttctttccaacttaggattcgactggatcaacgtgtggct
ttttaccatggtggtatggatcagacggaccgtatgcttgtacagcaacaatttatgaat
aatcaactggatatcgtatgctgcacaagtgcttttgggatgggcgttgacaagtcagat
attcgaattgtcattcattttcacttgcctcctcagttggaatcatttatccaagaagta
ggaagagcaggcagagatggtaagccttgtgctagtctggttttatttacccctaaggat
cattatctacctcaaatgttaattcagaacgagctgcctgaacaacaggatgtgaaacgt
gtgcttaaacgaattcagtcttacaggagagataaaggtgtattgcctaatgtggacgag
ctattaatagaattagagatttctgaatctcagtggaactttattcaccatcagcttgag
cgttaccaagtattagatggaaattccattttaaaggacccaaatgacgagaatattcta
caaaagctgctacaattcttaaatgaacggtggacgtataaacagaataagcttacagaa
attttacattgggttcatcagtcagaatgtcgccgacagcacttatatcaatctttccag
gaagaagtacgcgagccttatgtaccatgctgtgatggttgtggttttgaagtctcaaag
ctgcatttcaaagagagtaaagctgagagaatgggacaaacatgggaggatcggttaagg
atggtttttagtcaggaggaagttcatgaatcgaaagaaacaagctga
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