Halobacillus mangrovi: HM131_14960
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Entry
HM131_14960 CDS
T04799
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hmn
Halobacillus mangrovi
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmn03400
]
HM131_14960
Enzymes [BR:
hmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HM131_14960
DNA repair and recombination proteins [BR:
hmn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HM131_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
AAA_22
AAA_16
ResIII
AAA_30
WH_Egal
Motif
Other DBs
NCBI-ProteinID:
ARI78070
UniProt:
A0A1W5ZXT2
LinkDB
All DBs
Position
complement(3002696..3006415)
Genome browser
AA seq
1239 aa
AA seq
DB search
MVSWTEEQERAIYSHGSNILVAAAAGSGKTAVLVERIIQKLLHKEAPVNIDSLLVVTFTN
AAAQEMRNRVGQALAQALEENPGSHHLKKQLSLLQNASISTLHSFCMDVVRRYAYMLDLD
PGFRIADTIESDLIQQEVLEDLFEDWYGKEGTEQERFFDVVERFSSDRSDLDVEKLVLEL
YTFATQNPWPEAWLDQMVEMYEVKEGTGEEDLPWLNLLKQEVHSQLKAMEAEANQFLQLT
REPDGPYSYGETVDQDLEMIQQAKGALEHSWEELQSYMGESKFASLSRKKMDCDEAKKDK
AKKIRDSYKKRWNELRDEWFSRSLESYLKDMHELYPVMEQLAIIVKDFKQRYEQLKKEKA
IVDFSDLEHYCLQILLDDASTPDQPLPSQVAEGFHKQFSEVLIDEYQDTNLVQETLLRLL
TDGQEAGHLFMVGDVKQSIYRFRHAEPSLFLNKYKAYGLDGQPGERIDLARNFRSRKQVL
DATNYIFRQVLDEEVGEMEYEKEAELIYSNKIYDELTAEDAKAELYLIDREARETDTEEN
EEYKDLEKAQLEARAYGKKIRKWLGHEGEPPMQVVDKETGTKRPIQYRDIVILMRSMTWA
PTIVDELKQQGIPVYAELSTGYFEAIEIKVMLSLLKVIDNPMQDIPLASVLKSPIVGLNE
DELATLRLANKRTSYYEAIQKYRAANELGRKVGAFLKMIQSFRERARQGALSELIWDIYR
ETGYYDFVGGMPGGRQRQANLRALYDRARSYESTSFRGLFRFLRFIERIEERGDDLGAAR
ALGEQEDVVRIMTIHKSKGLEFPVVLLGAMDKQFNMMDLRNRYLLHKDYGFGSRYINPEK
RLMYPTLAYHALKQAKKRELLAEEMRVLYVALTRAKEKLVMVGNVPSFEKKQEKWQAFVD
TKSWVLPPHDRLDAKSYLDWVGPALIRHHHMEDLRGEIQVETADEIHKDESEWQVEIAHG
SEFAVIDELKEKRDEELQQAVKEWTPLPIEEEHDASIVDRLNFVYPHSKAAKSRAKQTVT
EIKRQRETKDEYSSDQLLVPYRAPIVRRPRFMQQDKQLTAAEKGSAMHTVMQHISFTREM
STSEVEEFVEHLVLKEILNRDEADVIDVDSITKFFYTPIGKLVMEAEQVEREVPFSLTLP
ANEVYSHWNEPTDEQVFIQGVIDAMIPYEDGWMILDYKSDQLPEGEESIERVLRERYQTQ
VQLYRTALEKIWKQPVRRSSLYFFNGGLSVEVENNGRQV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggtaagctggacagaagagcaagagcgggcgatttattcccacggttcaaatatttta
gtagctgccgcagccggatctggaaaaacagctgtactagttgaacgtattatccagaaa
ctgctgcataaagaagctccggtcaatatcgattcactgttggtcgtgacgtttacgaac
gctgctgcccaggagatgaggaatcgggtagggcaggcactagctcaagcccttgaagaa
aacccagggtcgcaccatttgaagaaacagctgtccttattgcagaatgcttccatttcg
accttgcactctttttgtatggacgtcgtgagacgatatgcatacatgcttgatttagat
ccaggttttagaattgcggatacgattgaatccgatttgattcagcaggaagtcttggag
gacctgtttgaggattggtacggaaaagaggggactgagcaggaacgcttctttgatgtg
gtcgaacgcttttccagtgacagaagtgacttagatgtggaaaagcttgtgttggagctt
tacacgtttgcaacacaaaacccatggcctgaggcatggcttgatcagatggttgaaatg
tatgaagtgaaggaaggaacaggggaagaggaccttccatggctcaatcttttgaagcaa
gaggtccacagccaattgaaggcgatggaagcagaagcaaaccaatttttacaattaacc
cgagaacctgatggtccttacagctacggggagaccgttgatcaggatctcgaaatgatc
caacaagccaaaggtgccttagagcattcttgggaagagctgcaatcgtacatgggtgaa
agtaaattcgcctccttatcacgaaaaaagatggattgtgatgaagcgaagaaagacaaa
gcgaaaaagattcgtgatagttataagaaacgttggaatgagcttcgtgatgaatggttt
tcccgctcgcttgagagctatctgaaagatatgcacgagctctaccctgtcatggaacaa
ctggccattattgttaaagacttcaaacaacggtacgaacagttgaaaaaggaaaaagca
atcgtcgacttctcggatctggagcattactgcttgcagattctgctggatgacgcgtct
acaccagatcagcccttgccttcacaagttgcggaagggtttcataagcaattctctgaa
gtgcttattgacgagtatcaagatacgaaccttgtccaggaaacactgctgcgcctgttg
accgacgggcaggaggcgggacacttatttatggtaggagacgtaaaacagagcatctac
cgcttccgtcacgcagagccttctctatttttgaataaatataaagcctatggattggat
ggtcagcccggtgaacggattgaccttgcccgtaattttagaagccgtaagcaggtgctt
gatgccacgaactatatttttcgtcaggtcctcgacgaagaagtcggggaaatggagtat
gaaaaagaagccgagttaatttatagtaataaaatttacgatgaattgactgcggaggat
gctaaagccgagctttatcttattgatcgagaagcaagagaaaccgacacagaggaaaat
gaagagtataaggatcttgaaaaagcacagcttgaagcaagagcctatggaaagaaaatc
cgtaaatggctaggtcatgaaggagaacctccgatgcaggtggtggacaaagagacagga
acgaagagaccgatccagtaccgggatattgtcatcttaatgcggtcaatgacttgggct
ccaacgattgttgatgaattaaaacaacaaggaatacctgtctatgctgagctgtctacg
ggttactttgaagcgattgagatcaaagtcatgctcagtcttcttaaggtgattgacaac
cccatgcaggacattccgcttgcctctgtattaaaatcgccgatcgtcggactgaatgaa
gacgagttggcaacactaaggttggccaacaaacggactagttattatgaagccattcag
aagtatcgggctgcaaatgagcttggtcggaaagtgggagcctttttaaagatgattcaa
agctttcgagaacgtgcgagacagggagctttatcggagctgatttgggatatttacaga
gagaccggatactatgacttcgtcggcgggatgccaggaggaaggcagcgacaggcgaac
ttaagagctctttacgacagggcaagatcctatgagtcgacatccttccgcggattgttc
cgattccttcgtttcattgagagaatcgaagagcgaggagatgatctcggtgccgctcgt
gcgctcggggaacaggaagatgtcgttcgcattatgacgatccataaaagtaaagggctt
gagtttcctgtcgttctcttaggagcgatggacaaacagtttaatatgatggatttgcga
aaccggtatttacttcacaaagactatgggttcggttcgcgttacatcaacccagaaaaa
cgtctcatgtatccaacgcttgcttaccatgccttgaaacaagcgaagaaaagagaatta
cttgcagaagaaatgcgagtcttgtatgtggcgttgacaagagcaaaggaaaaactggtc
atggttggaaatgttccttcttttgaaaaaaaacaggagaaatggcaagcgtttgttgat
acaaagagttgggtgcttccgccgcatgaccggttagatgccaaatcttatttagattgg
gttggaccggcgttaattcgtcatcatcacatggaagatctgcgcggagaaatccaggtg
gaaacagccgatgaaattcataaggatgaatcggagtggcaagtggaaattgcccatggc
agtgagtttgcggttattgatgagctgaaagaaaagcgggatgaagagctgcagcaagcg
gttaaagagtggacacctttacctattgaggaagagcatgatgcaagcattgttgatcgt
ctgaattttgtctatccccactcgaaggcggctaaatcaagggcgaagcagaccgttacg
gaaattaagcggcaaagggaaacaaaggatgaatactctagtgaccagctgcttgtccct
tatcgtgcaccaattgtacgtcgtccgcggtttatgcagcaagataaacagcttacggca
gcagaaaaagggagtgcgatgcatacggttatgcagcacatttcttttacaagagaaatg
tcaacctctgaagtagaagagttcgtggaacatttagtattgaaagaaattcttaataga
gatgaagctgatgtgattgatgtcgattctatcactaagtttttctacacgcctattgga
aaactagtcatggaagcagaacaagtagagcgtgaagttccgttcagtttgacactgccc
gcgaatgaagtatacagccactggaatgaaccaacagatgagcaagtctttatccagggg
gtcattgatgcgatgattccttatgaagacggctggatgatccttgactataaatccgat
cagcttcctgaaggagaagaatcaatcgagcgtgttttacgcgagcggtaccaaacgcaa
gtccaactatatcgaaccgctcttgaaaagatctggaagcaacctgtccgaagaagcagt
ctttacttctttaacggaggtttatcggtggaggtagagaacaatgggagacaagtgtga
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