Halobacillus mangrovi: HM131_18845
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Entry
HM131_18845 CDS
T04799
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hmn
Halobacillus mangrovi
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmn03009
]
HM131_18845
Enzymes [BR:
hmn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HM131_18845
Ribosome biogenesis [BR:
hmn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HM131_18845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_15
PrmA
Methyltransf_4
N6_N4_Mtase
Methyltr_RsmB-F
UPF0020
Methyltransf_32
PCMT
Saf-Nte_pilin
TrkA_N
zf_C2H2_ZHX
Motif
Other DBs
NCBI-ProteinID:
ARI79276
UniProt:
A0A1W6A0W8
LinkDB
All DBs
Position
complement(3783162..3784616)
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AA seq
484 aa
AA seq
DB search
MKKSKNKTHRADQHSGKQNSTQYNQSKGKHKKTFGHKRSQKSITAEVTCSGLNDEGKGIV
QWNGKQLEVPLLLPGEKAEVNIFQKGRSVHAELSRVISSAEERVDPPCPYYYECGGCQLQ
HMSNQAQSRFKQKTIDTLMKPYGKPEPILTMDHPYDYRNKSHTTFGLNHNRQVIGGLYAQ
NTHEIIPMDRCLIHDPKADEIVQTIKDYLKNSKMQPYNEDTRQGFLRHVLIKVGKVSGEI
MVVLVAASSEFKGKKKFVKTMRQAHPDITTMLLNVNKRDTSVVLGDQEQVLFGKGTITDT
LCGLEFEISSKSFYQINPVQTEKLYGKAIEMAGLTGEETVIDAYCGIGTIGLVASGKAGK
VIGVEANKDAVRDAIRNSKRNGVKNARFYQGDAGEFMVEMAARGEQADVVIMDPPRSGSD
EAFLSSVVKLQPKRIVYVSCNPETQARDLEYLVKNGFNVEGIQPVDMFPQTYHVESVAKL
VRKV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtccaaaaataaaactcaccgggctgatcaacactccggaaagcagaactca
actcaatataatcaatctaaaggaaagcataagaaaacctttggtcataaacgcagtcag
aaatccataaccgcagaggtgacctgctcaggactgaacgatgaaggtaaaggcattgtg
cagtggaacgggaagcagctggaagtaccacttttgctgcctggggaaaaggctgaggtg
aacatattccaaaaagggcgatctgtgcatgcggagttaagtcgtgtgatctcttcagca
gaagaacgggtcgacccgccgtgtccgtattactacgagtgcgggggatgccagcttcag
catatgagcaatcaggcgcaatcccgtttcaagcagaaaacgatagataccctgatgaag
ccgtatggaaagcctgagccgattttgacgatggatcatccgtatgattaccggaacaag
agccatacgacattcggtctgaatcataatcgtcaggtcattggcggtttgtatgctcaa
aatactcatgaaattattccgatggatcgctgtctcattcatgatccaaaagcggacgaa
attgtgcagaccattaaggactacttgaagaactcgaaaatgcagccgtataacgaagac
accagacaggggttcttgcggcacgtgttaatcaaagttggcaaagtcagtggagaaatc
atggtggtacttgtcgcagcctcctccgagtttaagggtaaaaagaaatttgtaaaaact
atgcgccaggctcacccggatattacaacaatgcttctgaatgtgaacaaacgggataca
agcgttgttcttggcgatcaggagcaagtgctgttcggaaagggaacgattacagacacc
ttgtgcggattggaatttgagatctcatcaaagtccttttatcagattaatcctgtccag
acggaaaagttgtatggaaaagcgattgaaatggccgggctgactggagaagaaaccgtg
atcgatgcctactgcgggattggtacgattggtcttgttgccagtgggaaagctggtaag
gtgatcggcgtagaggcgaataaagatgcggtccgagatgctatccggaattcaaagcgt
aacggtgtgaagaatgctcggttctaccagggtgatgctggagaattcatggtagagatg
gcagcgcgcggtgagcaagccgatgttgtgattatggatccaccgagaagcggaagtgac
gaagcattcttatcaagcgtggtgaagcttcagccgaagcgaatcgtatatgtgtcttgt
aatccggaaacgcaggcgagagatttagagtacttggtcaagaacggatttaacgttgaa
ggaattcaaccggtggatatgtttccacagacttatcacgtagaatcagttgcgaagcta
gtacgcaaggtgtag
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