Halobacillus mangrovi: HM131_19275
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Entry
HM131_19275 CDS
T04799
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
hmn
Halobacillus mangrovi
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmn03021
]
HM131_19275
Transcription machinery [BR:
hmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HM131_19275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
DUF134
HTH_23
DUF1492
CALS1
KORA
HTH_28
Sigma70_ECF
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ARI78830
UniProt:
A0A1W5ZZZ9
LinkDB
All DBs
Position
complement(3875613..3876392)
Genome browser
AA seq
259 aa
AA seq
DB search
MATRSQHHNDEVYEWIEHLQENPRDEAVQEKIVLVYKDLVESIARKYSKNSTIHEDLVQV
GMLGLLAAIRRYDPEFGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIKKAA
EELTSTLQRSPSVLEIADYLEVSEEDVLETMEMGKSYKALSVDRKIEADSDGSTVTILDL
IGNQEDGYSHIDQKMLLEKVLPILSEREQEILQCTYFENMSQKDTGERLGISQMHVSRLQ
RRALRKLREALQAESVEAF
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagatctcaacatcacaatgacgaagtatatgaatggatagagcatctacaa
gaaaacccacgggacgaagcagttcaagagaagattgtccttgtttataaggacctcgtg
gaatccattgctcgtaagtattctaagaatagtacaattcacgaagatttagtgcaagtc
ggcatgttaggtcttttagctgcaatccgcaggtatgaccctgagttcgggaaatccttc
gaatcgtttgccatacctacaatcattggggaaatcaaacggtttatcagggacaaaacg
tggagtgttcatgtgcctcgtaggattaaggagctcggaccgaagattaaaaaagcagca
gaagaactgacaagtacccttcaacgctctccttctgtgcttgagattgctgattatctg
gaagtttctgaagaagatgtgttagagactatggaaatgggcaaaagctataaagcgctg
tctgtggatcggaagattgaagccgattccgatggaagtaccgtaacgatccttgatttg
attggtaaccaggaagatgggtactcgcatatcgatcagaaaatgctgttagaaaaagtt
ctccccattcttagtgagagggaacaggaaattctgcaatgtacctattttgaaaacatg
agtcaaaaggacacaggagaaagactcggcatatcccaaatgcatgtttctcgattgcag
cgaagagcgcttcgcaaattgagagaggctcttcaagccgaatcggttgaggcgttttag
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