Halobacillus mangrovi: HM131_20080
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Entry
HM131_20080 CDS
T04799
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hmn
Halobacillus mangrovi
Pathway
hmn03030
DNA replication
hmn03430
Mismatch repair
hmn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HM131_20080
03430 Mismatch repair
HM131_20080
03440 Homologous recombination
HM131_20080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmn03032
]
HM131_20080
03400 DNA repair and recombination proteins [BR:
hmn03400
]
HM131_20080
Enzymes [BR:
hmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HM131_20080
DNA replication proteins [BR:
hmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HM131_20080
DNA repair and recombination proteins [BR:
hmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HM131_20080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
DUF4460
PH_3
Motif
Other DBs
NCBI-ProteinID:
ARI78982
UniProt:
A0A1W6A0E4
LinkDB
All DBs
Position
complement(4036620..4037342)
Genome browser
AA seq
240 aa
AA seq
DB search
MNPFVQFVKDLSDRLGSGFSSLNQNDPSKVAYVRNLERQLRNKDTLVVPFEELSVVVFDL
ETTGFYPYKGDEILSIGAVKVEGTKILEDQSFYSLVYSESAPSEEITKLTGITGEMLLES
PAMRDVLKEFYSYVKTDTLVAHHANHEKQFMNHATWLALRKNFQHRIVDTSFLTKIIHKE
KDLVSLDDCCAHYGISIKHRHHAFHDAMATAKLWVESIKDIQELGFENLNDVYTYLATLK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttttgtacaattcgtaaaagatttgtctgacaggcttggcagcggattctct
tctttgaatcagaatgacccttcaaaagtggcttatgtaagaaatctggaacgacaactg
cggaataaagatacacttgttgttccatttgaagaactttcagtggtggtgttcgactta
gaaacgacagggttttacccttacaagggagacgaaattctttcgattggggctgtgaaa
gtagaggggacgaaaatacttgaggatcagtccttttattctcttgtctatagtgagtca
gcaccttcagaagagattacaaagctcacaggaattacgggggagatgttattagaatct
ccggctatgcgtgatgtgctgaaggaattttactcttatgttaaaacagatacgctagtc
gctcaccatgcaaaccacgaaaagcaatttatgaatcatgcaacgtggctagctttaagg
aaaaactttcaacaccggattgtcgatacatctttcttaactaaaatcattcataaggag
aaggacctggttagtcttgatgactgctgtgctcattacggaatcagtattaagcatcga
caccacgccttccatgatgcgatggccactgcaaagctttgggttgaaagcattaaggat
atacaagagttagggtttgaaaatttaaacgacgtttatacctatttggctacactaaag
taa
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