Heliomicrobium modesticaldum: HM1_0075
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Entry
HM1_0075 CDS
T00653
Symbol
lcfA
Name
(GenBank) long-chain-fatty-acid-coa ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hmo
Heliomicrobium modesticaldum
Pathway
hmo00061
Fatty acid biosynthesis
hmo00071
Fatty acid degradation
hmo01100
Metabolic pathways
hmo01212
Fatty acid metabolism
hmo02024
Quorum sensing
hmo04146
Peroxisome
Module
hmo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HM1_0075 (lcfA)
00071 Fatty acid degradation
HM1_0075 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HM1_0075 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HM1_0075 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hmo01004
]
HM1_0075 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmo04147
]
HM1_0075 (lcfA)
Enzymes [BR:
hmo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HM1_0075 (lcfA)
Lipid biosynthesis proteins [BR:
hmo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HM1_0075 (lcfA)
Exosome [BR:
hmo04147
]
Exosomal proteins
Exosomal proteins of breast milk
HM1_0075 (lcfA)
Exosomal proteins of breast cancer cells
HM1_0075 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABZ82700
UniProt:
B0TI27
LinkDB
All DBs
Position
complement(63352..65055)
Genome browser
AA seq
567 aa
AA seq
DB search
MERTSCPDFNEWNVGKDWLRSYPSEVPHRLTYSRETVPEMLKSTVDAFPHHGAISYLGVR
ITYQQLWTDVTRFADALVRMGLCPGDAVCIMLPNCPQAVIAFYGILHAGAVVVMANPLYV
ERELQYQLQDSGAKIIVALDQLQERVMGAIEKTKIEQVIFTGAHDYLTTAQSPACSSTSP
VIGDTRLHRWLDVLGAEREKVDFSSRRTDDVALIQYTGGTTGTPKGVMLTHGNINANTQQ
IRAWFYRFEPGKERVLCVLPFFHVYGLTMGMHLGVAIGAELILLPRFDSDRILEIIAKER
PTMFPGTPTMYIALINHPKVRQYNLSSIKGCISGAAGLPVEVQQRFEELTGGRVVEGYGL
TEASPVTHCIPLWHKRKAGSIGLPLPDTEAKIVDPETAAVIAGGEVGELVVKGPQVMKGY
WNRPDETSAVLRDGWLFTGDLAYMDEDGFFHIVGRKKDIIIAGGYNIYPREVEEVLFEHP
GIQEAVVVGVPDPYRGETVKAYIVRKAGIDVSVAEIEQFCRSNLASYKVPRAIEFRTALP
KTLSGKILRRQLLEEEKEVAAKNIKNS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
gtggagaggacaagctgtcctgacttcaatgagtggaatgtcggcaaagactggttgcgc
agttatccatcggaagtgccacaccgcttaacctacagcagagaaacggtgccggaaatg
ttgaaaagcaccgtcgatgccttcccccatcacggagcgatttcctatctgggagtgcga
ataacctatcagcagttgtggaccgatgtgaccagatttgccgatgccctggttcggatg
ggcctgtgccctggtgatgccgtctgcatcatgctccccaattgcccacaggcggtcatc
gccttctatggcatccttcacgctggcgccgttgtggtcatggccaatccgctctatgtt
gagcgggaactgcaataccagttgcaggattcaggcgccaagatcatcgtcgccttagac
caactgcaagagcgggtgatgggggcgatcgaaaagacgaagatcgaacaggtcattttc
acgggcgcccacgattatctcacgacagcccagagcccagcctgttcttccacaagcccg
gtcatcggcgatacccgactccatcgctggttggatgtcttgggcgcggaaagagagaaa
gtcgacttttcgtcaagaaggacggatgatgtggcgctgatccagtacaccggcgggacg
acgggaacgccaaaaggcgtcatgctgacgcatgggaatatcaacgcgaatacccagcag
atccgggcgtggttttatcggtttgaaccgggaaaagaacgggtgctctgtgttttacct
tttttccacgtctatgggttgacaatgggcatgcatctcggcgtggccatcggcgccgaa
ctgatcctgctgcctcgctttgacagcgacagaatcctggagataatcgctaaggagcgt
ccgaccatgtttccaggaacgccgaccatgtacatcgcgctcatcaaccatcctaaggtt
cgccagtataacctttcctcgatcaaaggatgcatcagtggcgctgcaggattgcctgtg
gaggtgcaacagcggttcgaagagctgacaggtggtcgtgttgtggaaggctacgggttg
acagaagcatctccggtgacccactgcatccctttgtggcacaaacgaaaagcaggtagc
attggactgcctttgccggacacggaagcgaaaattgtcgatccggagaccgcagcggtg
atcgccggcggagaagttggtgaattggttgtcaaagggccgcaggtgatgaaaggatac
tggaaccgtccggacgagacgagcgcggtgttgcgcgatgggtggctgttcacgggcgac
ctggcctacatggatgaagatggattttttcacatcgttggccggaagaaagacatcatc
atcgctggcggatacaacatctaccctcgtgaggtcgaagaggttctcttcgaacaccct
ggcattcaggaagctgttgtcgtcggtgtacctgacccgtatcgaggggaaacagtgaag
gcctatatcgtgcgcaaagccggcatcgatgtcagcgtcgctgaaatcgaacaattctgc
cggagcaatcttgccagctataaagtcccacgggcgattgagttccggacagcattgccg
aagacactctccggtaaaatcttgcggcgtcagttgctggaagaggaaaaagaggtggct
gcaaagaatataaaaaattcatga
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