Heliomicrobium modesticaldum: HM1_0408
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Entry
HM1_0408 CDS
T00653
Name
(GenBank) DNA polymerase iii polc-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hmo
Heliomicrobium modesticaldum
Pathway
hmo03030
DNA replication
hmo03430
Mismatch repair
hmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HM1_0408
03430 Mismatch repair
HM1_0408
03440 Homologous recombination
HM1_0408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmo03032
]
HM1_0408
03400 DNA repair and recombination proteins [BR:
hmo03400
]
HM1_0408
Enzymes [BR:
hmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HM1_0408
DNA replication proteins [BR:
hmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HM1_0408
DNA repair and recombination proteins [BR:
hmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HM1_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABZ83025
UniProt:
B0TF42
LinkDB
All DBs
Position
376321..377088
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AA seq
255 aa
AA seq
DB search
MRFFDPVEVSSLIETFRYLFGLERSGFPGRMPEPALSARLVEKCRRNRGRHSPFRLLRDI
TFVVFDTETTGLSVPNDDVIALGGVALPPGGEGAEWTEDTGKVRVFDRLVNPHRPIPVLA
REITGIDDDMVFSQPTIYPVLDDFLDFIDGAVLVAHGIAFDVGFLDKYLRPLRTKLYHPV
IDTITLSRVLEPFRAEHSLDALVADYGITPRRRHSALGDAQMTADLFAAMLVRLQKLRQV
HTLGDLQRILAQQHL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctttttcgatccggtggaggtgtcatccttgattgaaacttttcgctatcttttc
ggccttgaacgcagcggtttccccgggcggatgcccgaaccggccctgtccgcccgctta
gtggaaaagtgtcgtcgcaatcgggggcgccatagcccctttcgactgctccgggacatc
actttcgtcgtctttgatactgagacaacaggactgagtgttcctaacgacgatgtgatc
gctctcggcggcgtagccctgccgcctggtggcgaaggggcggaatggaccgaagatacc
gggaaggtgcgagtctttgaccgtctcgtcaacccccatcgccctatccctgttctggcg
cgagagatcaccggcatcgatgatgatatggttttttcccaaccgaccatctatccggtt
cttgacgactttctggattttatcgacggcgccgtcctggtggcccacgggatcgccttc
gatgtgggatttctcgacaagtacctgcgcccgctccgaacgaagctctatcaccctgtc
atcgacacgatcaccctatcgcgcgtcttggaaccttttcgcgccgaacacagcctcgac
gccctggtcgcagactacgggatcacgccccgccgccgccacagcgccctcggcgacgcg
cagatgacggcggatctgtttgcagccatgctggtccgtctgcaaaaacttcggcaagta
cacactctcggcgatttgcagcgtattttggcgcagcagcacctctag
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