Heliomicrobium modesticaldum: HM1_0758
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Entry
HM1_0758 CDS
T00653
Symbol
holB
Name
(GenBank) DNA polymerase iii delta prime subunit, putative
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hmo
Heliomicrobium modesticaldum
Pathway
hmo03030
DNA replication
hmo03430
Mismatch repair
hmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HM1_0758 (holB)
03430 Mismatch repair
HM1_0758 (holB)
03440 Homologous recombination
HM1_0758 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmo03032
]
HM1_0758 (holB)
03400 DNA repair and recombination proteins [BR:
hmo03400
]
HM1_0758 (holB)
Enzymes [BR:
hmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HM1_0758 (holB)
DNA replication proteins [BR:
hmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HM1_0758 (holB)
DNA repair and recombination proteins [BR:
hmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HM1_0758 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
Mg_chelatase
Reovirus_L2_GTase
Motif
Other DBs
NCBI-ProteinID:
ABZ83797
UniProt:
B0TB70
LinkDB
All DBs
Position
1236821..1237843
Genome browser
AA seq
340 aa
AA seq
DB search
MAVRLLQITGQERAIRQLSRGLLANRVAHAYLFSGPQGVGKKTAARAFAQSVLCLERAGG
DACASCPACRQFQGGSHPDLFSLSPEGTTLKIEQIRNLQKRIRYRPYLSSHQVVLIEQAE
TMQGPSANALLKILEEPPGPTVFILITDRGHGILPTIRSRCLPVYFQPVPSGEIARFLKE
KGVSAGHVSLLTLLADGRWDRAARLAAEGLPAGRERARQVLDGLALTGDSRIFQLAEEWD
KDKEGIAEFFDYLTLLLRDRLLIAGAGGAEVPVINGDITGGADRWPLPVLLTALDTVMAA
RRLLDTNASARLLVEDTLLKLRDLARGEPLTPLTAAKVNL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcgattattgcaaatcacgggccaggaacgggccatccggcagttgtcccgg
ggccttttggcgaaccgggtagcccacgcctacctgttttccggaccgcagggcgtcggc
aaaaagacagccgcccgcgccttcgcccagtctgtcctctgcctggaacgggcaggaggc
gatgcctgtgcatcctgtcccgcctgccggcagttccagggcggcagccatcctgatctc
ttcagcctgtcgcctgaggggacaaccctcaaaatcgaacagatccggaacctgcaaaag
cgcatccgctaccgcccttacctgtcgtcccatcaggtcgtcttgatcgaacaggcggag
acgatgcagggtccctccgccaacgccctgttgaagatcctggaggagccgccgggaccg
actgtctttatcctgatcaccgaccgcggtcacggcatcctgcccacgatccgctcccgt
tgcctgcccgtctattttcaacctgtcccgagcggggagatcgcccgctttttgaaagaa
aagggcgtttccgcaggccatgtttccctgctgacgctgctggctgacgggcgctgggac
cgcgccgcccggctggccgccgagggattgccggcggggcgggaaagagcgcgccaggtg
ctcgacggactggccctgaccggtgacagccgcatctttcagctcgccgaggagtgggac
aaggataaggaaggcatcgctgagttttttgattacctgacgctcctgctgcgagaccgc
ttgctgatcgccggcgccggcggggcggaggtgcctgtgatcaacggcgacatcaccggc
ggcgctgaccggtggcccctgccggtcctgttgaccgccttggacacggtcatggcggca
cgccgtctgttagatacgaacgccagcgcgcggctgctggtggaggacacgctgctgaag
ctgcgcgatctggcccggggagagcccctgacgcccttgactgcagccaaagttaaccta
tag
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